D. rerio Gene: cecr2 - ENSDARG00000078310 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000078310
Namececr2
Descriptioncat eye syndrome chromosome region, candidate 2 [Source:ZFIN;Acc:ZDB-GENE-131121-533]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch211-276c7.3

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.11e3
  • 1.11e3
96.26089
  • 96.26089
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
4.44e3
  • 4.44e3
  • 6.03e3
  • 9.86e3
  • 1.01e4
  • 1.01e4
  • 1.07e4
  • 1.07e4
  • 1.18e4
  • 1.38e4
84.98640
  • 84.98640
  • 79.62922
  • 66.67524
  • 65.91464
  • 65.75357
  • 63.94548
  • 63.68786
  • 60.16264
  • 53.50156
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
5.58e3
  • 5.58e3
81.14005
  • 81.14005
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
6.56e3
  • 6.56e3
77.81579
  • 77.81579
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
7.14e3
  • 7.14e3
  • 7.45e3
  • 8.62e3
75.88366
  • 75.88366
  • 74.81858
  • 70.87790
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
7.43e3
  • 7.43e3
74.89396
  • 74.89396
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000106zygote stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
8.12e3
  • 8.12e3
  • 9.25e3
  • 1.02e4
  • 1.07e4
  • 1.09e4
  • 1.18e4
  • 1.22e4
  • 1.26e4
  • 1.32e4
  • 1.34e4
  • 1.42e4
  • 1.43e4
72.54930
  • 72.54930
  • 68.74822
  • 65.47630
  • 63.93071
  • 63.11968
  • 60.25734
  • 58.89999
  • 57.38519
  • 55.28580
  • 54.73395
  • 52.10648
  • 51.54880
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
8.48e3
  • 8.48e3
  • 9.13e3
  • 9.15e3
  • 1.00e4
  • 1.01e4
71.33530
  • 71.33530
  • 69.13471
  • 69.07644
  • 66.05719
  • 65.89445
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
8.61e3
  • 8.61e3
70.89223
  • 70.89223
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
64.84883
  • 64.84883
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.54756
  • 63.54756
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
  • 1.49e4
61.80118
  • 61.80118
  • 49.70341
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.19e4
  • 1.19e4
59.67664
  • 59.67664
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
  • 1.55e4
59.61648
  • 59.61648
  • 47.77204
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
58.62302
  • 58.62302
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.29e4
  • 1.29e4
56.48502
  • 56.48502
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
54.62796
  • 54.62796
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.36e4
  • 1.36e4
53.91817
  • 53.91817
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
1.37e4
  • 1.37e4
  • 1.63e4
  • 1.68e4
53.60492
  • 53.60492
  • 44.91981
  • 43.33189
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.39e4
  • 1.39e4
53.17515
  • 53.17515
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.41e4
  • 1.41e4
52.49523
  • 52.49523
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.43e4
  • 1.43e4
51.80572
  • 51.80572
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
50.04945
  • 50.04945
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBX004976
EnsemblENSDARG00000078310 (cecr2)
Uniprot/SPTREMBLF1RCN2, F1RCN2_DANRE
ZFINZDB-GENE-131121-533 (cecr2)

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