D. rerio Gene: CEP170B (1 to many) - ENSDARG00000078327 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000078327
NameCEP170B (1 to many)
Descriptionsi:ch73-212j7.1 [Source:ZFIN;Acc:ZDB-GENE-081104-258]
OrganismDanio rerio (zebrafish)
Synonym(s)cep170r, f1r627, fam68c, kiaa0284
Orthologs(s)17 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
4.57e3
  • 4.57e3
84.71
  • 84.71
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
9.06e3
  • 9.06e3
69.65
  • 69.65
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.25
  • 60.25
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
1.40e4
  • 1.40e4
  • 1.42e4
  • 2.09e4
  • 2.20e4
53.05
  • 53.05
  • 52.35
  • 29.89
  • 26.21
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.49e4
  • 1.49e4
49.99
  • 49.99
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.62e4
  • 1.62e4
  • 1.62e4
45.91
  • 45.91
  • 45.73
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.66e4
  • 1.66e4
44.27
  • 44.27
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.87e4
  • 1.87e4
  • 2.05e4
37.49
  • 37.49
  • 31.23
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.07e4
  • 2.07e4
30.82
  • 30.82
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.18e4
  • 2.18e4
26.98
  • 26.98
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Deuterostomia3 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000078327.

Cross-references

EnsemblENSDARG00000078327 (CEP170B (1 to many))
HGNCHGNC:20362 (CEP170B (1 to many))
ZFINZDB-GENE-081104-258 (si:ch73-212j7.1)
EMBLBX248523, CU207409
Uniprot/SPTREMBLF1RA07, F1RA07_DANRE

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