Gene: FO704819.2 - ENSDARG00000078399 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000078399
Name	FO704819.2
Description	-
Organism	Danio rerio (zebrafish)
Synonym(s)	acsl6
Orthologs(s)	8 orthologs
Paralog(s)	11 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	3.92e3 3.92e3	86.87 86.87	AEIR AEIR
UBERON:0000922	embryo	[+] 5 stages UBERON:0000068embryo stage ZFS:0000029Pharyngula:Prim-5 UBERON:0004707pharyngula stage ZFS:0000033Hatching:Long-pec ZFS:0000037Larval:Day 5	4.04e3 4.04e3 4.11e3 4.82e3 6.29e3 9.30e3	86.49 86.49 86.25 83.85 78.95 68.85	AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0003982	mature ovarian follicle	[+] 1 stage UBERON:0000066fully formed stage	4.76e3 4.76e3	84.05 84.05	AEIR AEIR
UBERON:0000970	eye	[+] 1 stage ZFS:0000031Pharyngula:Prim-25	5.33e3 5.33e3	82.17 82.17	AEIR AEIR
UBERON:0019248	early embryo	[+] 1 stage UBERON:0000107cleavage stage	5.86e3 5.86e3	80.38 80.38	AEIR AEIR
UBERON:0004734	gastrula	[+] 2 stages ZFS:0000022Gastrula:Bud ZFS:0000019Gastrula:Shield	6.18e3 6.18e3 8.21e3	79.32 79.32 72.52	AEIR AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	6.41e3 6.41e3	78.52 78.52	AEIR AEIR
UBERON:0002548	larva	[+] 2 stages UBERON:0000069larval stage ZFS:0000037Larval:Day 5	7.55e3 7.55e3 1.69e4	74.74 74.74 43.45	AEIR AEIR AEIR
UBERON:0000307	blastula	[+] 2 stages ZFS:0000011Blastula:1k-cell ZFS:0000015Blastula:Dome	8.41e3 8.41e3 8.55e3	71.85 71.85 71.39	AEIR AEIR AEIR
UBERON:0000966	retina	[+] 1 stage ZFS:0000037Larval:Day 5	9.48e3 9.48e3	68.25 68.25	AEIR AEIR
UBERON:0000033	head	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000066fully formed stage	1.02e4 1.02e4 1.18e4	65.75 65.75 60.52	AEIR AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	1.21e4 1.21e4	59.32 59.32	AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000066fully formed stage	1.26e4 1.26e4	57.95 57.95	AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	1.26e4 1.26e4	57.78 57.78	AEIR AEIR
UBERON:0001630	muscle organ	[+] 1 stage UBERON:0000066fully formed stage	1.27e4 1.27e4	57.50 57.50	AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000066fully formed stage	1.37e4 1.37e4	54.08 54.08	AEIR AEIR
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	1.54e4 1.54e4	48.52 48.52	AEIR AEIR
CL:0000094	granulocyte	[+] 1 stage UBERON:0000066fully formed stage	1.58e4 1.58e4	47.26 47.26	AEIR AEIR
UBERON:0000948	heart	[+] 2 stages ZFS:0000036Larval:Day 4 UBERON:0000066fully formed stage	1.66e4 1.66e4 1.76e4	44.56 44.56 41.14	AEIR AEIR AEIR
UBERON:0002385	muscle tissue	[+] 1 stage UBERON:0000066fully formed stage	1.73e4 1.73e4	41.91 41.91	AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	1.92e4 1.92e4	35.87 35.87	AEIR AEIR
UBERON:0006860	swim bladder	[+] 1 stage UBERON:0000066fully formed stage	2.17e4 2.17e4	27.49 27.49	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	2.42e4 2.42e4	19.03 19.03	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Bilateria	7 species Drosophila melanogaster (fruit fly) Caenorhabditis elegans (nematode) Drosophila ananassae Drosophila mojavensis Drosophila simulans Drosophila virilis Drosophila yakuba	8 genes FBgn0036821 CG3961 WBGene00013575 acs-5 WBGene00022037 acs-13 FBgn0087842 GF10802 FBgn0134589 GI11830 FBgn0184056 GD12324 FBgn0200754 GJ13530 FBgn0240005 GE22800	Compare expression	[+]

Orthology information comes from OMA : ENSDARG00000078399.

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Chordata	3 genes ENSDARG00000003854 acsl1b ENSDARG00000030514 acsl1a ENSDARG00000075931 acsl5	Compare expression	[+]
Opisthokonta	7 genes ENSDARG00000003854 acsl1b ENSDARG00000004078 acsl4a ENSDARG00000010752 acsl4b ENSDARG00000014674 acsl3b ENSDARG00000030514 acsl1a ENSDARG00000032079 acsl3a ENSDARG00000075931 acsl5	Compare expression	[+]
Eukaryota	11 genes ENSDARG00000003854 acsl1b ENSDARG00000004078 acsl4a ENSDARG00000004094 acsbg2 ENSDARG00000010752 acsl4b ENSDARG00000014674 acsl3b ENSDARG00000030514 acsl1a ENSDARG00000032079 acsl3a ENSDARG00000059503 ACSF3 ENSDARG00000061201 acsf2 ENSDARG00000062077 acsbg1 ENSDARG00000075931 acsl5	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000078399.

Cross-references

Ensembl	ENSDARG00000078399 (FO704819.2)
EMBL	CABZ01071162, CABZ01071163, CABZ01071164, CABZ01071165, CABZ01071166
Uniprot/SPTREMBL	E7F351, E7F351_DANRE