D. rerio Gene: si:dkey-73p2.3 - ENSDARG00000078832 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000078832
Namesi:dkey-73p2.3
Descriptionsi:dkey-73p2.3 [Source:ZFIN;Acc:ZDB-GENE-131126-12]
OrganismDanio rerio (zebrafish)
Paralog(s)18 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
6.41e3
  • 6.41e3
78.52
  • 78.52
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
65.75
  • 65.75
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.35e4
  • 1.35e4
54.75
  • 54.75
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
50.35
  • 50.35
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.76e4
  • 1.76e4
40.95
  • 40.95
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.81e4
  • 1.81e4
  • 2.35e4
39.37
  • 39.37
  • 21.26
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.81e4
  • 1.81e4
39.37
  • 39.37
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.85e4
  • 1.85e4
38.09
  • 38.09
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
1.90e4
  • 1.90e4
  • 2.05e4
  • 2.14e4
  • 2.15e4
36.35
  • 36.35
  • 31.27
  • 28.45
  • 27.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
2.00e4
  • 2.00e4
33.07
  • 33.07
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.11e4
  • 2.11e4
29.27
  • 29.27
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.28e4
  • 2.28e4
23.68
  • 23.68
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
2.30e4
  • 2.30e4
  • 2.38e4
22.98
  • 22.98
  • 20.28
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Otophysi18 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000078832.

Cross-references

EnsemblENSDARG00000078832 (si:dkey-73p2.3)
ZFINZDB-GENE-131126-12 (si:dkey-73p2.3)
EMBLCR774195
Uniprot/SPTREMBLF1QD73, F1QD73_DANRE, X1WBF3, X1WBF3_DANRE

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