D. rerio Gene: nxph2b - ENSDARG00000079188 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000079188
Namenxph2b
Descriptionneurexophilin 2b [Source:ZFIN;Acc:ZDB-GENE-090708-1]
OrganismDanio rerio (zebrafish)
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
4.83e3
  • 4.83e3
83.82
  • 83.82
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
  • 1.49e4
60.28
  • 60.28
  • 50.06
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.13
  • 60.13
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
1.39e4
  • 1.39e4
  • 1.91e4
  • 2.00e4
  • 2.04e4
  • 2.14e4
53.60
  • 53.60
  • 36.13
  • 32.89
  • 31.59
  • 28.40
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
1.43e4
  • 1.43e4
52.19
  • 52.19
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.50e4
  • 1.50e4
  • 2.03e4
49.72
  • 49.72
  • 32.19
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.70e4
  • 1.70e4
43.06
  • 43.06
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.83e4
  • 1.83e4
38.70
  • 38.70
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.85e4
  • 1.85e4
38.02
  • 38.02
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.88e4
  • 1.88e4
37.06
  • 37.06
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.88e4
  • 1.88e4
36.90
  • 36.90
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.98e4
  • 1.98e4
33.61
  • 33.61
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.07e4
  • 2.07e4
30.56
  • 30.56
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.09e4
  • 2.09e4
29.87
  • 29.87
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Vertebrata2 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000079188.

Cross-references

EnsemblENSDARG00000079188 (nxph2b)
ZFINZDB-GENE-090708-1 (nxph2b)
Uniprot/SPTREMBLF1Q928, F1Q928_DANRE

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