D. rerio Gene: si:dkey-73p2.2 - ENSDARG00000079245 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000079245
Namesi:dkey-73p2.2
Descriptionsi:dkey-73p2.2 [Source:ZFIN;Acc:ZDB-GENE-131119-50]
OrganismDanio rerio (zebrafish)
Paralog(s)18 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
6.70e3
  • 6.70e3
77.58
  • 77.58
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
61.17
  • 61.17
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.42e4
  • 1.42e4
52.44
  • 52.44
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.58e4
  • 1.58e4
47.16
  • 47.16
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.63e4
  • 1.63e4
  • 1.86e4
45.40
  • 45.40
  • 37.63
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
1.67e4
  • 1.67e4
44.24
  • 44.24
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
1.67e4
  • 1.67e4
  • 1.84e4
  • 1.85e4
  • 2.01e4
44.22
  • 44.22
  • 38.30
  • 37.93
  • 32.81
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.69e4
  • 1.69e4
43.37
  • 43.37
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.86e4
  • 1.86e4
37.88
  • 37.88
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
2.08e4
  • 2.08e4
  • 2.19e4
30.51
  • 30.51
  • 26.56
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
2.12e4
  • 2.12e4
29.05
  • 29.05
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Otophysi18 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000079245.

Cross-references

EnsemblENSDARG00000079245 (si:dkey-73p2.2)
ZFINZDB-GENE-131119-50 (si:dkey-73p2.2)
EMBLCR790363
Uniprot/SPTREMBLF1R9M3, F1R9M3_DANRE, F1RBS9, F1RBS9_DANRE

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