D. rerio Gene: si:ch211-264f5.6 - ENSDARG00000079372 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000079372
Namesi:ch211-264f5.6
Descriptionsi:ch211-264f5.6 [Source:ZFIN;Acc:ZDB-GENE-081104-208]
OrganismDanio rerio (zebrafish)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.44e3
  • 1.44e3
95.19640
  • 95.19640
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
2.72e3
  • 2.72e3
  • 2.04e4
90.88839
  • 90.88839
  • 31.70947
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
3.08e3
  • 3.08e3
89.68289
  • 89.68289
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000109gastrula stage
3.39e3
  • 3.39e3
  • 5.57e3
  • 9.36e3
  • 9.54e3
  • 1.12e4
  • 1.31e4
88.64940
  • 88.64940
  • 81.36781
  • 68.66762
  • 68.06118
  • 62.50668
  • 56.17389
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
4.10e3
  • 4.10e3
  • 5.31e3
  • 7.07e3
  • 7.55e3
  • 1.05e4
  • 1.10e4
  • 1.12e4
  • 1.13e4
  • 1.56e4
86.26394
  • 86.26394
  • 82.20745
  • 76.32649
  • 74.73402
  • 64.96196
  • 63.22158
  • 62.56418
  • 62.26809
  • 47.74550
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
8.95e3
  • 8.95e3
  • 1.23e4
  • 1.32e4
70.04634
  • 70.04634
  • 58.81013
  • 55.92469
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
8.98e3
  • 8.98e3
69.93042
  • 69.93042
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
9.27e3
  • 9.27e3
  • 1.32e4
  • 1.58e4
68.96360
  • 68.96360
  • 55.95037
  • 47.08653
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
9.54e3
  • 9.54e3
68.05411
  • 68.05411
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000036Larval:Day 4
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000037Larval:Day 5
1.02e4
  • 1.02e4
  • 1.03e4
  • 1.06e4
  • 1.28e4
  • 1.30e4
  • 1.33e4
  • 1.36e4
  • 1.38e4
  • 1.45e4
  • 1.45e4
  • 1.49e4
  • 1.52e4
  • 1.60e4
65.88313
  • 65.88313
  • 65.54593
  • 64.38168
  • 57.08207
  • 56.45022
  • 55.52175
  • 54.61387
  • 53.94830
  • 51.50484
  • 51.46288
  • 50.05247
  • 49.24810
  • 46.43037
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.18e4
  • 1.18e4
60.59753
  • 60.59753
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.01283
  • 59.01283
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.28e4
  • 1.28e4
57.15394
  • 57.15394
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.34e4
  • 1.34e4
55.20098
  • 55.20098
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
1.35e4
  • 1.35e4
54.68218
  • 54.68218
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
1.41e4
  • 1.41e4
52.81519
  • 52.81519
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.41e4
  • 1.41e4
52.62814
  • 52.62814
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
1.42e4
  • 1.42e4
52.60449
  • 52.60449
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.46e4
  • 1.46e4
51.18337
  • 51.18337
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
50.49727
  • 50.49727
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.51e4
  • 1.51e4
49.38553
  • 49.38553
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.53e4
  • 1.53e4
48.89536
  • 48.89536
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.66e4
  • 1.66e4
44.52332
  • 44.52332
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.68e4
  • 1.68e4
43.58571
  • 43.58571
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.72e4
  • 1.72e4
42.26575
  • 42.26575
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.83e4
  • 1.83e4
38.57282
  • 38.57282
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.10e4
  • 2.10e4
29.60342
  • 29.60342
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLCU207217
EnsemblENSDARG00000079372 (si:ch211-264f5.6)
Uniprot/SPTREMBLE9QJI4, E9QJI4_DANRE
ZFINZDB-GENE-081104-208 (si:ch211-264f5.6)

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