D. rerio Gene: si:dkey-88j15.4 - ENSDARG00000079471 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000079471
Namesi:dkey-88j15.4
Descriptionsi:dkey-88j15.4 [Source:ZFIN;Acc:ZDB-GENE-100922-55]
OrganismDanio rerio (zebrafish)
Paralog(s)18 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
8.94e3
  • 8.94e3
70.08
  • 70.08
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
9.74e3
  • 9.74e3
67.39
  • 67.39
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.31e4
  • 1.31e4
55.99
  • 55.99
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.45e4
  • 1.45e4
51.49
  • 51.49
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.76
  • 49.76
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.58e4
  • 1.58e4
47.13
  • 47.13
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.63e4
  • 1.63e4
45.38
  • 45.38
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.68e4
  • 1.68e4
43.79
  • 43.79
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.69e4
  • 1.69e4
43.30
  • 43.30
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.72e4
  • 1.72e4
42.57
  • 42.57
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
1.83e4
  • 1.83e4
38.60
  • 38.60
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.95e4
  • 1.95e4
34.73
  • 34.73
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.99e4
  • 1.99e4
33.48
  • 33.48
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
2.18e4
  • 2.18e4
  • 2.43e4
  • 2.77e4
26.84
  • 26.84
  • 18.73
  • 7.41
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.48e4
  • 2.48e4
16.96
  • 16.96
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.55e4
  • 2.55e4
14.78
  • 14.78
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.56e4
  • 2.56e4
14.38
  • 14.38
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Otophysi18 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000079471.

Cross-references

EnsemblENSDARG00000079471 (si:dkey-88j15.4)
ZFINZDB-GENE-100922-55 (si:dkey-88j15.4)
EMBLBX005442
Uniprot/SPTREMBLE9QG14, E9QG14_DANRE, F1QMP0, F1QMP0_DANRE

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