We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

D. rerio Gene: FAM171A2 (1 to many) - ENSDARG00000079656 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000079656
NameFAM171A2 (1 to many)
Descriptionfamily with sequence similarity 171 member A2 [Source:HGNC Symbol;Acc:HGNC:30480]
OrganismDanio rerio (zebrafish)
Synonym(s)mgc34829
Orthologs(s)12 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
4.55e3
  • 4.55e3
84.76
  • 84.76
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
6.83e3
  • 6.83e3
  • 1.11e4
  • 1.33e4
  • 1.58e4
  • 1.65e4
77.12
  • 77.12
  • 62.83
  • 55.55
  • 47.10
  • 44.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
8.62e3
  • 8.62e3
71.13
  • 71.13
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
  • 1.59e4
60.93
  • 60.93
  • 46.81
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.30e4
  • 1.30e4
56.62
  • 56.62
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.43e4
  • 1.43e4
  • 1.44e4
52.07
  • 52.07
  • 51.91
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.05e4
  • 2.05e4
31.30
  • 31.30
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Euteleostomi1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000079656.

Cross-references

EnsemblENSDARG00000079656 (FAM171A2 (1 to many))
HGNCHGNC:30480 (FAM171A2 (1 to many))
EMBLCABZ01055348
Uniprot/SPTREMBLE7F922, E7F922_DANRE

Do not show this banner again