D. rerio Gene: zgc:162612 - ENSDARG00000079699 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000079699
Namezgc:162612
Descriptionzgc:162612 [Source:ZFIN;Acc:ZDB-GENE-070410-88]
OrganismDanio rerio (zebrafish)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
8.78e3
  • 8.78e3
  • 1.09e4
70.58886
  • 70.58886
  • 63.47812
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.08e4
  • 1.08e4
63.94264
  • 63.94264
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.60379
  • 63.60379
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
1.23e4
  • 1.23e4
  • 1.35e4
  • 1.49e4
  • 1.63e4
  • 1.74e4
58.87272
  • 58.87272
  • 54.92452
  • 50.00167
  • 45.42440
  • 41.89371
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.36e4
  • 1.36e4
54.47115
  • 54.47115
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.56e4
  • 1.56e4
  • 1.70e4
47.75100
  • 47.75100
  • 43.23728
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.61e4
  • 1.61e4
46.07109
  • 46.07109
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.70e4
  • 1.70e4
42.90952
  • 42.90952
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.71e4
  • 1.71e4
  • 2.29e4
42.60403
  • 42.60403
  • 23.46047
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.72e4
  • 1.72e4
42.34337
  • 42.34337
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.78e4
  • 1.78e4
40.45026
  • 40.45026
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.79e4
  • 1.79e4
40.11988
  • 40.11988
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.83e4
  • 1.83e4
38.72350
  • 38.72350
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.97e4
  • 1.97e4
33.97525
  • 33.97525
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.06e4
  • 2.06e4
30.95134
  • 30.95134
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLBC135031, FP016243
EnsemblENSDARG00000079699 (zgc:162612)
Uniprot/SPTREMBLA4IGC7, A4IGC7_DANRE
ZFINZDB-GENE-070410-88 (zgc:162612)

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