D. rerio Gene: si:dkey-126g1.7 - ENSDARG00000086703 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000086703
Namesi:dkey-126g1.7
Descriptionsi:dkey-126g1.7 [Source:ZFIN;Acc:ZDB-GENE-090313-181]
OrganismDanio rerio (zebrafish)
Synonym(s)si:dkey-126g1.6
Paralog(s)12 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
4.21e3
  • 4.21e3
85.90
  • 85.90
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
5.46e3
  • 5.46e3
81.73
  • 81.73
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.90
  • 63.90
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
61.22
  • 61.22
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
1.26e4
  • 1.26e4
  • 1.40e4
57.91
  • 57.91
  • 53.14
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.51e4
  • 1.51e4
49.46
  • 49.46
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.51e4
  • 1.51e4
49.43
  • 49.43
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.54e4
  • 1.54e4
48.38
  • 48.38
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.60e4
  • 1.60e4
46.34
  • 46.34
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
1.64e4
  • 1.64e4
  • 1.68e4
  • 1.81e4
  • 2.30e4
45.24
  • 45.24
  • 43.60
  • 39.55
  • 22.94
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.68e4
  • 1.68e4
43.90
  • 43.90
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.73e4
  • 1.73e4
41.93
  • 41.93
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.80e4
  • 1.80e4
39.60
  • 39.60
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
1.90e4
  • 1.90e4
36.25
  • 36.25
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.92e4
  • 1.92e4
35.62
  • 35.62
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.93e4
  • 1.93e4
35.45
  • 35.45
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.95e4
  • 1.95e4
  • 2.30e4
34.68
  • 34.68
  • 23.14
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata12 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000086703.

Cross-references

EnsemblENSDARG00000086703 (si:dkey-126g1.7)
ZFINZDB-GENE-090313-181 (si:dkey-126g1.7)
EMBLBX927210
Uniprot/SPTREMBLR4GEH5, R4GEH5_DANRE, R4GES6, R4GES6_DANRE

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