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D. rerio Gene: zgc:100918 - ENSDARG00000087243 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000087243
Namezgc:100918
Descriptionzgc:100918 [Source:ZFIN;Acc:ZDB-GENE-040927-2]
OrganismDanio rerio (zebrafish)
Synonym(s)rab7-like
Orthologs(s)6 orthologs
Paralog(s)100 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.36e3
  • 1.36e3
95.46
  • 95.46
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.90e3
  • 1.90e3
93.63
  • 93.63
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.94e3
  • 1.94e3
93.51
  • 93.51
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.97e3
  • 1.97e3
93.42
  • 93.42
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
2.05e3
  • 2.05e3
93.14
  • 93.14
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
2.12e3
  • 2.12e3
  • 2.92e3
92.89
  • 92.89
  • 90.22
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
2.28e3
  • 2.28e3
92.36
  • 92.36
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.29e3
  • 2.29e3
92.32
  • 92.32
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
2.30e3
  • 2.30e3
92.31
  • 92.31
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.53e3
  • 2.53e3
91.53
  • 91.53
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.70e3
  • 2.70e3
90.98
  • 90.98
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
2.82e3
  • 2.82e3
  • 2.98e3
  • 3.00e3
  • 5.06e3
  • 5.10e3
90.57
  • 90.57
  • 90.03
  • 89.97
  • 83.07
  • 82.94
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
2.95e3
  • 2.95e3
90.13
  • 90.13
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
3.02e3
  • 3.02e3
  • 4.43e3
89.89
  • 89.89
  • 85.18
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
3.06e3
  • 3.06e3
89.77
  • 89.77
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
3.06e3
  • 3.06e3
  • 4.35e3
89.77
  • 89.77
  • 85.42
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
3.18e3
  • 3.18e3
89.34
  • 89.34
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
3.69e3
  • 3.69e3
  • 6.40e3
87.63
  • 87.63
  • 78.57
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
4.01e3
  • 4.01e3
86.58
  • 86.58
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
4.69e3
  • 4.69e3
84.28
  • 84.28
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
5.02e3
  • 5.02e3
83.20
  • 83.20
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
5.20e3
  • 5.20e3
82.59
  • 82.59
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
5.40e3
  • 5.40e3
  • 7.45e3
81.93
  • 81.93
  • 75.06
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
5.57e3
  • 5.57e3
81.36
  • 81.36
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • ZFS:0000049segmentation
  • UBERON:0000066fully formed stage
7.13e3
  • 7.13e3
  • 1.35e4
  • 1.47e4
  • 1.49e4
  • 1.50e4
76.12
  • 76.12
  • 54.65
  • 50.90
  • 49.95
  • 49.81
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
8.72e3
  • 8.72e3
70.80
  • 70.80
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Orthology information comes from OMA : ENSDARG00000087243.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Euteleostomi1 geneCompare expression
Chordata2 genesCompare expression
Opisthokonta23 genesCompare expression
Eukaryota100 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000087243.

Cross-references

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