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D. rerio Gene: zgc:171951 - ENSDARG00000087311 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000087311
Namezgc:171951
Descriptionzgc:171951 [Source:ZFIN;Acc:ZDB-GENE-070822-22]
OrganismDanio rerio (zebrafish)
Orthologs(s)26 orthologs
Paralog(s)6 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.45e4
  • 1.45e4
51.38
  • 51.38
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.62e4
  • 1.62e4
45.60
  • 45.60
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.70e4
  • 1.70e4
42.95
  • 42.95
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.00e4
  • 2.00e4
33.15
  • 33.15
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.09e4
  • 2.09e4
30.08
  • 30.08
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
2.13e4
  • 2.13e4
  • 2.51e4
28.73
  • 28.73
  • 15.88
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
2.17e4
  • 2.17e4
27.23
  • 27.23
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.24e4
  • 2.24e4
24.99
  • 24.99
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.42e4
  • 2.42e4
18.93
  • 18.93
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Euteleostomi4 genesCompare expression
Eukaryota6 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000087311.

Cross-references

EnsemblENSDARG00000087311 (zgc:171951)
ZFINZDB-GENE-070822-22 (zgc:171951)
EMBLBX000438
Uniprot/SPTREMBLF1QWY9, F1QWY9_DANRE

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