D. rerio Gene: si:ch211-5k11.12 - ENSDARG00000087390 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000087390
Namesi:ch211-5k11.12
Descriptionsi:ch211-5k11.12 [Source:ZFIN;Acc:ZDB-GENE-131120-128]
OrganismDanio rerio (zebrafish)
Synonym(s)hbbe1, hbbe1.2gn, mgc173646gn, ottdarp00000001844gn, si:busm1-118j2.5gn, si:ch211-5k11.12gn

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
80.0
  • 80.0
  • 85.7
  • 132
  • 279
  • 294
99.73299
  • 99.73299
  • 99.71362
  • 99.55723
  • 99.05920
  • 99.01127
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
159
  • 159
99.46628
  • 99.46628
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
2.05e3
  • 2.05e3
  • 2.08e4
93.08578
  • 93.08578
  • 29.69429
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.83e4
  • 1.83e4
38.11849
  • 38.11849
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.89e4
  • 1.89e4
36.26301
  • 36.26301
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.99e4
  • 1.99e4
32.85247
  • 32.85247
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.17e4
  • 2.17e4
26.66250
  • 26.66250
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

Do not show this banner again