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D. rerio Gene: nudt9 - ENSDARG00000087927 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000087927
Namenudt9
Descriptionnudix (nucleoside diphosphate linked moiety X)-type motif 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2669]
OrganismDanio rerio (zebrafish)
Synonym(s)fu33g07, sb:cb392, wu:fj16b09, wu:fu33g07, zgc:63924
Orthologs(s)26 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
2.09e3
  • 2.09e3
  • 3.05e3
  • 3.46e3
  • 3.58e3
  • 3.83e3
  • 5.30e3
93.00
  • 93.00
  • 89.80
  • 88.42
  • 88.00
  • 87.16
  • 82.24
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001017central nervous system
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
2.30e3
  • 2.30e3
  • 2.64e3
  • 2.64e3
  • 3.15e3
  • 3.20e3
  • 8.54e3
  • 8.96e3
92.31
  • 92.31
  • 91.17
  • 91.17
  • 89.47
  • 89.28
  • 71.42
  • 69.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2000120lateral line ganglion
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
2.49e3
  • 2.49e3
  • 2.49e3
  • 3.32e3
  • 3.73e3
  • 3.73e3
  • 8.30e3
  • 8.30e3
91.67
  • 91.67
  • 91.67
  • 88.89
  • 87.50
  • 87.50
  • 72.22
  • 72.22
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.73e3
  • 2.73e3
90.85
  • 90.85
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.91e3
  • 2.91e3
90.27
  • 90.27
AEIR
  • AEIR
UBERON:0001042chordate pharynx
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
2.99e3
  • 2.99e3
  • 3.32e3
90.00
  • 90.00
  • 88.89
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000011Blastula:1k-cell
3.09e3
  • 3.09e3
  • 4.08e3
  • 4.85e3
  • 5.49e3
  • 5.76e3
89.67
  • 89.67
  • 86.33
  • 83.77
  • 81.62
  • 80.70
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
3.16e3
  • 3.16e3
89.43
  • 89.43
AEIR
  • AEIR
UBERON:0000925endoderm
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000027Segmentation:20-25 somites
3.20e3
  • 3.20e3
  • 3.45e3
  • 3.73e3
89.28
  • 89.28
  • 88.46
  • 87.50
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001714cranial ganglion
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000026Segmentation:14-19 somites
3.20e3
  • 3.20e3
  • 3.73e3
  • 7.47e3
89.28
  • 89.28
  • 87.50
  • 74.99
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003050olfactory placode
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
3.32e3
  • 3.32e3
  • 3.32e3
  • 3.74e3
  • 7.47e3
88.89
  • 88.89
  • 88.89
  • 87.49
  • 74.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
3.48e3
  • 3.48e3
  • 3.81e3
88.35
  • 88.35
  • 87.25
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0000106zygote stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000109gastrula stage
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
3.53e3
  • 3.53e3
  • 3.82e3
  • 3.88e3
  • 5.56e3
  • 6.06e3
  • 6.73e3
  • 6.92e3
  • 7.14e3
  • 7.19e3
  • 7.77e3
  • 8.01e3
  • 8.48e3
  • 8.86e3
  • 9.68e3
  • 1.19e4
  • 1.39e4
  • 1.42e4
  • 1.50e4
88.19
  • 88.19
  • 87.22
  • 87.02
  • 81.38
  • 79.71
  • 77.45
  • 76.81
  • 76.08
  • 75.93
  • 73.97
  • 73.19
  • 71.61
  • 70.33
  • 67.60
  • 60.00
  • 53.44
  • 52.43
  • 49.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002028hindbrain
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
3.56e3
  • 3.56e3
  • 3.74e3
  • 5.87e3
  • 8.96e3
  • 9.10e3
88.09
  • 88.09
  • 87.49
  • 80.34
  • 69.98
  • 69.55
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
3.68e3
  • 3.68e3
87.68
  • 87.68
AEIR
  • AEIR
UBERON:0001675trigeminal ganglion
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
3.73e3
  • 3.73e3
  • 4.27e3
  • 7.47e3
  • 8.30e3
87.50
  • 87.50
  • 85.71
  • 74.99
  • 72.22
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000004nose
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
3.73e3
  • 3.73e3
  • 4.39e3
  • 8.79e3
  • 8.79e3
87.50
  • 87.50
  • 85.29
  • 70.57
  • 70.57
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003060pronephric duct
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000026Segmentation:14-19 somites
3.74e3
  • 3.74e3
  • 3.74e3
  • 3.93e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
87.49
  • 87.49
  • 87.49
  • 86.84
  • 74.99
  • 74.99
  • 74.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
4.10e3
  • 4.10e3
86.27
  • 86.27
AEIR
  • AEIR
UBERON:0001049neural tube
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
4.48e3
  • 4.48e3
  • 4.48e3
  • 4.55e3
84.99
  • 84.99
  • 84.99
  • 84.77
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
4.48e3
  • 4.48e3
  • 4.48e3
  • 5.34e3
  • 8.83e3
  • 9.51e3
84.99
  • 84.99
  • 84.99
  • 82.13
  • 70.44
  • 68.16
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
4.61e3
  • 4.61e3
  • 5.77e3
  • 6.92e3
84.56
  • 84.56
  • 80.69
  • 76.82
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
4.63e3
  • 4.63e3
84.52
  • 84.52
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
4.70e3
  • 4.70e3
  • 5.16e3
84.25
  • 84.25
  • 82.71
AEIR
  • AEIR
  • AEIR
UBERON:0001894diencephalon
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
4.72e3
  • 4.72e3
  • 4.98e3
  • 5.20e3
84.20
  • 84.20
  • 83.32
  • 82.60
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
4.80e3
  • 4.80e3
  • 5.39e3
83.92
  • 83.92
  • 81.95
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
4.81e3
  • 4.81e3
83.90
  • 83.90
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000068embryo stage
5.35e3
  • 5.35e3
  • 5.84e3
  • 6.85e3
  • 6.95e3
  • 6.98e3
  • 7.24e3
  • 7.42e3
  • 7.48e3
  • 7.98e3
  • 8.75e3
82.10
  • 82.10
  • 80.45
  • 77.06
  • 76.74
  • 76.63
  • 75.76
  • 75.14
  • 74.97
  • 73.29
  • 70.71
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
5.43e3
  • 5.43e3
81.81
  • 81.81
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
5.49e3
  • 5.49e3
  • 1.47e4
81.62
  • 81.62
  • 50.88
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
5.62e3
  • 5.62e3
  • 5.90e3
  • 6.73e3
  • 1.16e4
81.19
  • 81.19
  • 80.26
  • 77.47
  • 61.23
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
5.92e3
  • 5.92e3
80.18
  • 80.18
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
6.34e3
  • 6.34e3
78.79
  • 78.79
AEIR
  • AEIR
UBERON:0003070trigeminal placode complex
  • ZFS:0000026Segmentation:14-19 somites
6.40e3
  • 6.40e3
78.56
  • 78.56
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
6.86e3
  • 6.86e3
  • 7.40e3
77.02
  • 77.02
  • 75.23
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
6.96e3
  • 6.96e3
  • 1.50e4
76.69
  • 76.69
  • 49.89
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
7.00e3
  • 7.00e3
76.55
  • 76.55
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
7.28e3
  • 7.28e3
75.62
  • 75.62
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
8.06e3
  • 8.06e3
73.02
  • 73.02
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
8.64e3
  • 8.64e3
71.06
  • 71.06
AEIR
  • AEIR
UBERON:0001997olfactory epithelium
  • UBERON:0000104life cycle
8.88e3
  • 8.88e3
70.25
  • 70.25
AEIR
  • AEIR
UBERON:0004880chordamesoderm
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000019Gastrula:Shield
9.96e3
  • 9.96e3
  • 1.03e4
  • 1.03e4
  • 1.09e4
  • 1.09e4
  • 1.09e4
66.66
  • 66.66
  • 65.37
  • 65.37
  • 63.63
  • 63.63
  • 63.63
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2000001Kupffer's vesicle
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
9.96e3
  • 9.96e3
  • 1.03e4
  • 1.03e4
66.66
  • 66.66
  • 65.37
  • 65.37
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.15e4
  • 1.15e4
61.40
  • 61.40
AEIR
  • AEIR
ZFA:0000092axis (Danio)
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000021Gastrula:90%-epiboly
1.16e4
  • 1.16e4
  • 1.16e4
  • 1.16e4
  • 1.23e4
  • 1.23e4
  • 1.23e4
61.09
  • 61.09
  • 61.09
  • 61.09
  • 58.80
  • 58.80
  • 58.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
1.32e4
  • 1.32e4
55.82
  • 55.82
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.35e4
  • 1.35e4
54.75
  • 54.75
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.41e4
  • 1.41e4
52.90
  • 52.90
AEIR
  • AEIR
UBERON:0001772corneal epithelium
  • ZFS:0000039Larval:Days 7-13
  • ZFS:0000042Juvenile:Days 30-44
1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi18 species19 genesCompare expression
Bilateria25 species26 genesCompare expression

Orthology information comes from OMA : ENSDARG00000087927.

Cross-references

EnsemblENSDARG00000087927 (nudt9)
ZFINZDB-GENE-040426-2669 (nudt9)
EMBLFP016144
Uniprot/SPTREMBLF1QL34, F1QL34_DANRE

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