D. rerio Gene: zgc:174704 - ENSDARG00000088375 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000088375
Namezgc:174704
Descriptionzgc:174704 [Source:ZFIN;Acc:ZDB-GENE-080218-5]
OrganismDanio rerio (zebrafish)
Paralog(s)439 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
6.52e3
  • 6.52e3
  • 8.93e3
78.17
  • 78.17
  • 70.11
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
7.84e3
  • 7.84e3
  • 1.84e4
73.76
  • 73.76
  • 38.38
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000040Larval:Days 14-20
  • UBERON:0000068embryo stage
9.02e3
  • 9.02e3
  • 1.40e4
  • 1.41e4
69.80
  • 69.80
  • 53.18
  • 52.63
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.06e4
  • 1.06e4
64.61
  • 64.61
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
1.39e4
  • 1.39e4
  • 1.63e4
  • 1.67e4
  • 2.27e4
53.38
  • 53.38
  • 45.37
  • 43.92
  • 23.87
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.61e4
  • 1.61e4
  • 2.17e4
46.18
  • 46.18
  • 27.20
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
1.76e4
  • 1.76e4
41.14
  • 41.14
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
1.88e4
  • 1.88e4
37.07
  • 37.07
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.00e4
  • 2.00e4
33.05
  • 33.05
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.02e4
  • 2.02e4
32.43
  • 32.43
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.11e4
  • 2.11e4
29.37
  • 29.37
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.15e4
  • 2.15e4
28.16
  • 28.16
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eukaryota439 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000088375.

Cross-references

EnsemblENSDARG00000088375 (zgc:174704)
ZFINZDB-GENE-080218-5 (zgc:174704)
EMBLBX663613
Uniprot/SPTREMBLF1R6G7, F1R6G7_DANRE

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