D. rerio Gene: hnrnpa0a - ENSDARG00000089302 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000089302
Namehnrnpa0a
Descriptionheterogeneous nuclear ribonucleoprotein A0a [Source:ZFIN;Acc:ZDB-GENE-030131-2249]
OrganismDanio rerio (zebrafish)
Synonym(s)fc01g05, wu:fc01g05, zgc:77366
Orthologs(s)17 orthologs
Paralog(s)439 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
176
  • 176
  • 184
  • 2.96e3
  • 3.44e3
99.41
  • 99.41
  • 99.39
  • 90.09
  • 88.50
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
194
  • 194
  • 363
  • 391
  • 478
  • 485
  • 533
99.35
  • 99.35
  • 98.79
  • 98.69
  • 98.40
  • 98.38
  • 98.22
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • UBERON:0000106zygote stage
211
  • 211
  • 242
  • 256
  • 302
  • 368
  • 396
  • 398
  • 405
  • 508
  • 569
  • 694
  • 789
  • 1.08e3
  • 8.82e3
99.30
  • 99.30
  • 99.19
  • 99.15
  • 98.99
  • 98.77
  • 98.68
  • 98.67
  • 98.65
  • 98.30
  • 98.10
  • 97.68
  • 97.36
  • 96.38
  • 70.48
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0004707pharyngula stage
  • ZFS:0000025Segmentation:10-13 somites
  • UBERON:0000068embryo stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
232
  • 232
  • 383
  • 425
  • 437
  • 483
  • 485
  • 525
  • 566
  • 665
  • 788
99.23
  • 99.23
  • 98.72
  • 98.58
  • 98.54
  • 98.39
  • 98.38
  • 98.24
  • 98.11
  • 97.78
  • 97.36
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
321
  • 321
98.93
  • 98.93
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
571
  • 571
98.09
  • 98.09
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
572
  • 572
  • 749
  • 1.06e3
98.09
  • 98.09
  • 97.50
  • 96.44
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
585
  • 585
98.04
  • 98.04
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
620
  • 620
  • 1.81e3
97.93
  • 97.93
  • 93.95
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
622
  • 622
  • 903
97.92
  • 97.92
  • 96.98
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
770
  • 770
  • 833
  • 1.01e4
  • 1.06e4
  • 1.11e4
97.43
  • 97.43
  • 97.21
  • 66.13
  • 64.42
  • 62.84
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
864
  • 864
  • 995
97.11
  • 97.11
  • 96.67
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
980
  • 980
  • 1.36e3
96.72
  • 96.72
  • 95.46
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.06e3
  • 1.06e3
96.47
  • 96.47
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.41e3
  • 1.41e3
95.29
  • 95.29
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.46e3
  • 1.46e3
95.12
  • 95.12
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.62e3
  • 1.62e3
94.57
  • 94.57
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.67e3
  • 1.67e3
94.43
  • 94.43
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.74e3
  • 1.74e3
94.17
  • 94.17
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
1.85e3
  • 1.85e3
93.80
  • 93.80
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.22e3
  • 2.22e3
92.58
  • 92.58
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.25e3
  • 2.25e3
92.48
  • 92.48
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.33e3
  • 2.33e3
92.21
  • 92.21
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.53e3
  • 2.53e3
91.53
  • 91.53
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
2.71e3
  • 2.71e3
90.94
  • 90.94
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
4.62e3
  • 4.62e3
84.54
  • 84.54
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
5.54e3
  • 5.54e3
81.47
  • 81.47
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
5.81e3
  • 5.81e3
80.54
  • 80.54
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.10e4
  • 1.10e4
63.01
  • 63.01
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Clupeocephala1 geneCompare expression
Euteleostomi2 genesCompare expression
Eukaryota439 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000089302.

Cross-references

EnsemblENSDARG00000089302 (hnrnpa0a)
ZFINZDB-GENE-030131-2249 (hnrnpa0a)
EMBLBX005228
Uniprot/SPTREMBLF1QS28, F1QS28_DANRE

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