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D. rerio Gene: hopx - ENSDARG00000089368 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000089368
Namehopx
DescriptionHOP homeobox [Source:ZFIN;Acc:ZDB-GENE-031016-2]
OrganismDanio rerio (zebrafish)
Synonym(s)a8e5b8, hop, q4v9k4
Orthologs(s)15 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
758
  • 758
97.47
  • 97.47
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.26e3
  • 1.26e3
95.79
  • 95.79
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.59e3
  • 1.59e3
94.70
  • 94.70
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.99e3
  • 1.99e3
93.33
  • 93.33
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
2.00e3
  • 2.00e3
  • 3.76e3
93.31
  • 93.31
  • 87.40
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
2.10e3
  • 2.10e3
  • 4.01e3
  • 1.42e4
92.97
  • 92.97
  • 86.59
  • 52.60
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.18e3
  • 2.18e3
92.72
  • 92.72
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.56e3
  • 2.56e3
91.44
  • 91.44
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.76e3
  • 2.76e3
90.76
  • 90.76
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
3.01e3
  • 3.01e3
89.92
  • 89.92
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000031Pharyngula:Prim-25
3.06e3
  • 3.06e3
  • 3.72e3
  • 4.07e3
  • 4.41e3
  • 7.98e3
  • 8.81e3
  • 9.86e3
  • 9.87e3
  • 1.05e4
  • 1.46e4
89.77
  • 89.77
  • 87.53
  • 86.37
  • 85.25
  • 73.29
  • 70.49
  • 66.97
  • 66.95
  • 64.75
  • 51.23
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
3.10e3
  • 3.10e3
89.63
  • 89.63
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
3.13e3
  • 3.13e3
89.54
  • 89.54
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
3.27e3
  • 3.27e3
89.04
  • 89.04
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
3.39e3
  • 3.39e3
88.65
  • 88.65
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000016Blastula:30%-epiboly
3.66e3
  • 3.66e3
  • 4.79e3
  • 7.03e3
  • 7.27e3
  • 9.91e3
87.75
  • 87.75
  • 83.96
  • 76.45
  • 75.67
  • 66.81
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
3.84e3
  • 3.84e3
  • 6.86e3
  • 1.12e4
87.15
  • 87.15
  • 77.02
  • 62.44
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
3.90e3
  • 3.90e3
86.94
  • 86.94
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
3.93e3
  • 3.93e3
  • 4.57e3
  • 9.36e3
  • 9.46e3
  • 9.53e3
  • 1.10e4
86.84
  • 86.84
  • 84.68
  • 68.67
  • 68.31
  • 68.10
  • 63.21
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
4.13e3
  • 4.13e3
  • 8.61e3
86.19
  • 86.19
  • 71.17
AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
4.18e3
  • 4.18e3
  • 9.99e3
86.00
  • 86.00
  • 66.56
AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
6.68e3
  • 6.68e3
77.62
  • 77.62
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
6.94e3
  • 6.94e3
76.77
  • 76.77
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • UBERON:0000106zygote stage
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000037Larval:Day 5
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
7.36e3
  • 7.36e3
  • 8.24e3
  • 8.25e3
  • 9.26e3
  • 9.34e3
  • 1.03e4
  • 1.05e4
  • 1.05e4
  • 1.06e4
  • 1.07e4
  • 1.08e4
  • 1.09e4
  • 1.11e4
  • 1.13e4
  • 1.13e4
  • 1.16e4
75.37
  • 75.37
  • 72.42
  • 72.38
  • 68.99
  • 68.74
  • 65.63
  • 64.84
  • 64.69
  • 64.43
  • 64.24
  • 63.94
  • 63.55
  • 62.72
  • 62.09
  • 62.04
  • 61.10
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
8.61e3
  • 8.61e3
71.16
  • 71.16
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
  • 1.65e4
57.18
  • 57.18
  • 44.78
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.38e4
  • 1.38e4
53.72
  • 53.72
AEIR
  • AEIR
UBERON:0002349myocardium
  • ZFS:0000033Hatching:Long-pec
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Cross-references

EnsemblENSDARG00000089368 (hopx)
ZFINZDB-GENE-031016-2 (hopx)
EMBLAF536198, BC096856, BC153537
Uniprot/SWISSPROTHOP_DANRE, Q8AYB8

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