Gene: ctrb1 - ENSDARG00000090428 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000090428
Name	ctrb1
Description	chymotrypsinogen B1 [Source:ZFIN;Acc:ZDB-GENE-030131-1171]
Organism	Danio rerio (zebrafish)
Synonym(s)	fb69e12, wu:fb61f07, wu:fb69e12
Orthologs(s)	29 orthologs
Paralog(s)	64 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000160	intestine	[+] 1 stage UBERON:0000066fully formed stage	5.00 5.00	99.99 99.99	AEIR AEIR
UBERON:0002106	spleen	[+] 1 stage UBERON:0000066fully formed stage	14.0 14.0	99.96 99.96	AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	40.0 40.0	99.87 99.87	AEIR AEIR
UBERON:0000468	multi-cellular organism	[+] 5 stages ZFS:0000040Larval:Days 14-20 ZFS:0000036Larval:Day 4 ZFS:0000042Juvenile:Days 30-44 ZFS:0000037Larval:Day 5 ZFS:0000033Hatching:Long-pec	81.7 81.7 346 493 2.38e3 1.81e4	99.73 99.73 98.85 98.35 92.04 39.42	AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0002548	larva	[+] 3 stages ZFS:0000037Larval:Day 5 ZFS:0000035Larval:Protruding-mouth UBERON:0000069larval stage	145 145 1.63e3 8.36e3	99.52 99.52 94.55 72.02	AEIR AEIR AEIR AEIR
UBERON:0000922	embryo	[+] 4 stages ZFS:0000037Larval:Day 5 ZFS:0000033Hatching:Long-pec UBERON:0004707pharyngula stage UBERON:0000068embryo stage	196 196 2.24e4 2.67e4 2.77e4	99.35 99.35 24.86 10.45 7.41	AEIR AEIR AEIR AEIR AEIR
UBERON:0000033	head	[+] 2 stages UBERON:0000066fully formed stage ZFS:0000037Larval:Day 5	628 628 1.20e4	97.90 97.90 59.88	AEIR AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	723 723	97.58 97.58	AEIR AEIR
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	852 852	97.15 97.15	AEIR AEIR
UBERON:0002082	cardiac ventricle	[+] 1 stage UBERON:0000066fully formed stage	1.35e3 1.35e3	95.48 95.48	AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000066fully formed stage	2.38e3 2.38e3	92.03 92.03	AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	2.39e3 2.39e3	92.01 92.01	AEIR AEIR
UBERON:0001264	pancreas	[+] 4 stages ZFS:0000037Larval:Day 5 ZFS:0000035Larval:Protruding-mouth ZFS:0000033Hatching:Long-pec ZFS:0000032Pharyngula:High-pec	3.32e3 3.32e3 1.07e4 1.12e4 1.16e4	88.89 88.89 64.28 62.49 61.10	AEIR AEIR AEIR AEIR AEIR
UBERON:0000948	heart	[+] 2 stages UBERON:0000066fully formed stage ZFS:0000036Larval:Day 4	3.46e3 3.46e3 5.67e3	88.41 88.41 81.03	AEIR AEIR AEIR
UBERON:0002385	muscle tissue	[+] 1 stage UBERON:0000066fully formed stage	9.45e3 9.45e3	68.35 68.35	AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000066fully formed stage	9.54e3 9.54e3	68.07 68.07	AEIR AEIR
UBERON:0003922	pancreatic epithelial bud	[+] 2 stages ZFS:0000033Hatching:Long-pec ZFS:0000032Pharyngula:High-pec	9.96e3 9.96e3 1.12e4	66.66 66.66 62.49	AEIR AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	1.01e4 1.01e4	66.27 66.27	AEIR AEIR
UBERON:0000017	exocrine pancreas	[+] 2 stages ZFS:0000035Larval:Protruding-mouth ZFS:0000036Larval:Day 4	1.19e4 1.19e4 1.49e4	60.00 60.00 50.00	AEIR AEIR AEIR
UBERON:0001630	muscle organ	[+] 1 stage UBERON:0000066fully formed stage	1.33e4 1.33e4	55.52 55.52	AEIR AEIR
UBERON:0006860	swim bladder	[+] 1 stage UBERON:0000066fully formed stage	1.52e4 1.52e4	48.97 48.97	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	1.55e4 1.55e4	48.12 48.12	AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	2.07e4 2.07e4	30.55 30.55	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

Affymetrix data: Bgee
In situ hybridization data: ZFIN
RNA-Seq data: Bgee

Sources of raw data:

Affymetrix data: ArrayExpress, GEO
In situ hybridization data: ZFIN
RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Euteleostomi	19 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Monodelphis domestica (opossum) Ornithorhynchus anatinus (platypus) Gallus gallus (chicken) Anolis carolinensis (green anole) Xenopus tropicalis (western clawed frog)	29 genes ENSG00000168925 CTRB1 ENSG00000168928 CTRB2 ENSMUSG00000031957 Ctrb1 ENSPTRG00000008355 CTRB2 ENSGGOG00000010642 CTRB2 ENSGGOG00000010654 CTRB1 ENSMMUG00000002629 ENSMMUG00000029083 ENSRNOG00000019068 Ctrb1 ENSBTAG00000008500 ENSBTAG00000011995 ENSSSCG00000023127 ENSSSCG00000030698 ENSECAG00000016086 ENSOCUG00000011106 ENSOCUG00000024901 ENSCAFG00000020083 ENSCAFG00000020084 ENSFCAG00000015359 ENSFCAG00000015360 ENSCPOG00000014582 ENSEEUG00000002891 ENSEEUG00000003920 ENSMODG00000019640 ENSOANG00000012853 ENSGALG00000000038 ENSACAG00000006769 ENSXETG00000015596 ctrb2 ENSXETG00000026902 ctrb1	Compare expression	[+]

Orthology information comes from OMA : ENSDARG00000090428.

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Clupeocephala	1 gene ENSDARG00000093844 zgc:136461	Compare expression	[+]
Vertebrata	3 genes ENSDARG00000039730 zgc:112160 ENSDARG00000093844 zgc:136461 ENSDARG00000101964 CTRL (1 to many)	Compare expression	[+]
Opisthokonta	64 genes ENSDARG00000010097 f9a ENSDARG00000017314 CELA1 (1 to many) ENSDARG00000027196 si:dkey-16l2.17 ENSDARG00000038891 AL954146.1 ENSDARG00000039579 cfd ENSDARG00000039730 zgc:112160 ENSDARG00000040282 zgc:92590 ENSDARG00000040513 zgc:92313 ENSDARG00000042003 si:dkey-78l4.13 ENSDARG00000042993 try ENSDARG00000043171 CELA1 (1 to many) ENSDARG00000043173 CELA1 (1 to many) ENSDARG00000043175 CELA1 (1 to many) ENSDARG00000046140 zgc:112038 ENSDARG00000052064 si:dkeyp-93a5.2 ENSDARG00000052517 AL954146.2 ENSDARG00000055011 si:dkey-33m11.7 ENSDARG00000055014 si:dkey-33m11.8 ENSDARG00000055644 prss60.2 ENSDARG00000056324 zgc:123295 ENSDARG00000056744 ela2 ENSDARG00000056765 ela2l ENSDARG00000056773 zgc:163079 ENSDARG00000059026 zgc:123217 ENSDARG00000061858 zgc:153968 ENSDARG00000063444 si:dkey-32n7.7 ENSDARG00000068680 ctrl ENSDARG00000070710 prss60.3 ENSDARG00000070713 prss60.1 ENSDARG00000071310 si:dkey-78l4.5 ENSDARG00000071381 si:dkey-78l4.11 ENSDARG00000071389 si:dkey-78l4.6 ENSDARG00000073742 prss59.2 ENSDARG00000077058 CELA1 (1 to many) ENSDARG00000077573 tmprss13b ENSDARG00000079274 prss59.1 ENSDARG00000088893 CTRL (1 to many) ENSDARG00000090267 CU062628.1 ENSDARG00000092518 si:dkey-21e2.11 ENSDARG00000092532 si:dkey-21e2.4 ENSDARG00000092788 si:dkey-21e2.15 ENSDARG00000092814 si:dkey-21e2.3 ENSDARG00000093415 si:dkey-78l4.1 ENSDARG00000093450 si:dkey-78l4.10 ENSDARG00000093843 si:dkey-21e2.7 ENSDARG00000093844 zgc:136461 ENSDARG00000094077 si:dkey-21e2.16 ENSDARG00000094662 si:dkey-21e2.8 ENSDARG00000094840 si:dkey-21e2.13 ENSDARG00000095005 si:dkey-21e2.10 ENSDARG00000095175 si:dkey-78l4.12 ENSDARG00000095355 si:dkey-78l4.7 ENSDARG00000095384 si:dkey-78l4.2 ENSDARG00000095438 si:dkey-78l4.4 ENSDARG00000095462 CELA1 (1 to many) ENSDARG00000095572 si:dkey-21e2.14 ENSDARG00000095729 si:dkey-21e2.12 ENSDARG00000096975 si:dkeyp-93a5.3 ENSDARG00000098651 si:dkey-21e2.12 ENSDARG00000100953 si:dkeyp-93a5.2 ENSDARG00000101956 CU571315.2 ENSDARG00000101964 CTRL (1 to many) ENSDARG00000101990 CU571315.3 ENSDARG00000102727 si:ch73-182e20.4	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000090428.

Cross-references

Ensembl	ENSDARG00000090428 (ctrb1)
ZFIN	ZDB-GENE-030131-1171 (ctrb1)
EMBL	CR356247
Uniprot/SPTREMBL	F1QFX9, F1QFX9_DANRE