D. rerio Gene: gnb1a - ENSDARG00000090454 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000090454
Namegnb1a
Descriptionguanine nucleotide binding protein (G protein), beta polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-030131-823]
OrganismDanio rerio (zebrafish)
Synonym(s)gnb1, wu:fb50b09, wu:fj94h04
Orthologs(s)24 orthologs
Paralog(s)439 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000035Larval:Protruding-mouth
101
  • 101
  • 1.29e3
  • 3.55e3
  • 5.15e3
  • 1.29e4
99.67
  • 99.67
  • 95.68
  • 88.12
  • 82.75
  • 56.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0000106zygote stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000025Segmentation:10-13 somites
  • UBERON:00072368 cell stage
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
755
  • 755
  • 1.01e3
  • 1.17e3
  • 1.36e3
  • 1.38e3
  • 1.61e3
  • 1.78e3
  • 2.15e3
  • 3.59e3
  • 4.10e3
  • 4.12e3
  • 4.23e3
  • 4.43e3
  • 5.03e3
  • 6.54e3
  • 6.79e3
  • 6.97e3
  • 8.96e3
  • 8.96e3
97.48
  • 97.48
  • 96.64
  • 96.08
  • 95.46
  • 95.38
  • 94.60
  • 94.04
  • 92.79
  • 88.00
  • 86.28
  • 86.21
  • 85.84
  • 85.17
  • 83.15
  • 78.12
  • 77.27
  • 76.66
  • 69.99
  • 69.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000030Pharyngula:Prim-15
867
  • 867
  • 1.13e3
  • 1.12e4
  • 1.49e4
97.10
  • 97.10
  • 96.22
  • 62.50
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
997
  • 997
96.67
  • 96.67
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
998
  • 998
96.66
  • 96.66
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
1.02e3
  • 1.02e3
  • 1.52e3
  • 1.53e3
  • 1.95e3
  • 2.76e3
  • 4.63e3
  • 4.67e3
  • 4.79e3
  • 5.42e3
  • 5.64e3
96.59
  • 96.59
  • 94.91
  • 94.89
  • 93.49
  • 90.75
  • 84.49
  • 84.37
  • 83.97
  • 81.86
  • 81.12
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000029Pharyngula:Prim-5
1.12e3
  • 1.12e3
  • 5.88e3
  • 9.51e3
  • 1.22e4
  • 1.34e4
96.25
  • 96.25
  • 80.31
  • 68.17
  • 59.08
  • 54.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
1.18e3
  • 1.18e3
  • 6.40e3
  • 1.10e4
  • 1.12e4
96.05
  • 96.05
  • 78.57
  • 63.32
  • 62.49
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.21e3
  • 1.21e3
  • 3.64e3
95.95
  • 95.95
  • 87.80
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.42e3
  • 1.42e3
95.24
  • 95.24
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.49e3
  • 1.49e3
95.01
  • 95.01
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.71e3
  • 1.71e3
  • 1.90e3
  • 2.16e3
94.27
  • 94.27
  • 93.63
  • 92.78
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.78e3
  • 1.78e3
  • 2.09e3
94.05
  • 94.05
  • 93.01
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.80e3
  • 1.80e3
93.98
  • 93.98
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
2.02e3
  • 2.02e3
93.25
  • 93.25
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.11e3
  • 2.11e3
92.93
  • 92.93
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.18e3
  • 2.18e3
92.70
  • 92.70
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
2.44e3
  • 2.44e3
  • 5.15e3
  • 6.24e3
  • 7.58e3
  • 7.62e3
  • 8.92e3
91.82
  • 91.82
  • 82.75
  • 79.12
  • 74.64
  • 74.48
  • 70.14
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2000136otic lateral line neuromast
  • ZFS:0000037Larval:Day 5
2.49e3
  • 2.49e3
91.67
  • 91.67
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
2.59e3
  • 2.59e3
91.34
  • 91.34
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.72e3
  • 2.72e3
90.89
  • 90.89
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.96e3
  • 2.96e3
90.10
  • 90.10
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
3.04e3
  • 3.04e3
89.83
  • 89.83
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
3.05e3
  • 3.05e3
89.79
  • 89.79
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
3.13e3
  • 3.13e3
  • 3.18e3
  • 6.13e3
  • 9.42e3
  • 9.58e3
89.54
  • 89.54
  • 89.35
  • 79.47
  • 68.47
  • 67.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
3.45e3
  • 3.45e3
88.46
  • 88.46
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
3.68e3
  • 3.68e3
87.68
  • 87.68
AEIR
  • AEIR
UBERON:0000004nose
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
4.27e3
  • 4.27e3
  • 1.21e4
85.71
  • 85.71
  • 59.36
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
4.84e3
  • 4.84e3
83.81
  • 83.81
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
6.30e3
  • 6.30e3
78.91
  • 78.91
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
6.92e3
  • 6.92e3
76.84
  • 76.84
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
7.27e3
  • 7.27e3
75.67
  • 75.67
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
7.36e3
  • 7.36e3
75.37
  • 75.37
AEIR
  • AEIR
UBERON:0015238pineal complex
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000036Larval:Day 4
7.47e3
  • 7.47e3
  • 9.96e3
  • 1.49e4
75.00
  • 75.00
  • 66.66
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
7.57e3
  • 7.57e3
74.64
  • 74.64
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
7.80e3
  • 7.80e3
73.88
  • 73.88
AEIR
  • AEIR
UBERON:0005886post-hyoid pharyngeal arch skeleton
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
8.53e3
  • 8.53e3
  • 1.07e4
71.43
  • 71.43
  • 64.28
AEIR
  • AEIR
  • AEIR
UBERON:0008904neuromast
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000033Hatching:Long-pec
8.53e3
  • 8.53e3
  • 9.60e3
71.43
  • 71.43
  • 67.85
AEIR
  • AEIR
  • AEIR
UBERON:0000151pectoral fin
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
1.03e4
  • 1.03e4
  • 1.07e4
65.61
  • 65.61
  • 64.27
AEIR
  • AEIR
  • AEIR
UBERON:0008897fin
  • ZFS:0000031Pharyngula:Prim-25
1.05e4
  • 1.05e4
64.99
  • 64.99
AEIR
  • AEIR
ZFA:0000093blastomere (Danio)
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • UBERON:00072322 cell stage
1.12e4
  • 1.12e4
  • 1.12e4
  • 1.49e4
62.50
  • 62.50
  • 62.50
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001003skin epidermis
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
1.14e4
  • 1.14e4
  • 1.21e4
  • 1.42e4
61.75
  • 61.75
  • 59.36
  • 52.35
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0010312immature eye
  • ZFS:0000029Pharyngula:Prim-5
1.35e4
  • 1.35e4
54.73
  • 54.73
AEIR
  • AEIR
UBERON:2001157posterior lateral line primordium
  • ZFS:0000030Pharyngula:Prim-15
1.36e4
  • 1.36e4
54.53
  • 54.53
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi17 species17 genesCompare expression
Bilateria24 species24 genesCompare expression

Orthology information comes from OMA : ENSDARG00000090454.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Otophysi1 geneCompare expression
Chordata3 genesCompare expression
Eukaryota439 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000090454.

Cross-references

EnsemblENSDARG00000090454 (gnb1a)
ZFINZDB-GENE-030131-823 (gnb1a)
EMBLBC056708, BC071277
Uniprot/SWISSPROTGBB1_DANRE, Q6PH57

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