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D. rerio Gene: myh6 - ENSDARG00000090637 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000090637
Namemyh6
Descriptionmyosin, heavy chain 6, cardiac muscle, alpha [Source:ZFIN;Acc:ZDB-GENE-031112-1]
OrganismDanio rerio (zebrafish)
Synonym(s)amhc, atrial myosin heavy chain, unm s459, unm_s459, wea, weak atrium
Orthologs(s)10 orthologs
Paralog(s)21 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000035Larval:Protruding-mouth
336
  • 336
  • 702
  • 8.65e3
  • 1.20e4
  • 1.44e4
98.88
  • 98.88
  • 97.65
  • 71.04
  • 59.98
  • 51.90
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002081cardiac atrium
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000032Pharyngula:High-pec
1.87e3
  • 1.87e3
  • 2.99e3
  • 7.47e3
93.75
  • 93.75
  • 90.00
  • 75.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004291heart rudiment
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
2.49e3
  • 2.49e3
  • 9.96e3
  • 1.03e4
91.67
  • 91.67
  • 66.65
  • 65.37
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002302myocardium of atrium
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
2.99e3
  • 2.99e3
  • 7.47e3
  • 1.49e4
90.00
  • 90.00
  • 75.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0010227future cardiac atrium
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
4.98e3
  • 4.98e3
  • 7.47e3
  • 9.96e3
83.34
  • 83.34
  • 75.00
  • 66.67
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
5.98e3
  • 5.98e3
  • 8.96e3
  • 8.96e3
  • 1.08e4
79.99
  • 79.99
  • 69.99
  • 69.99
  • 63.87
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004141heart tube
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
5.98e3
  • 5.98e3
  • 7.47e3
  • 9.96e3
79.99
  • 79.99
  • 74.99
  • 66.65
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000746cardiac muscle cell
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
7.47e3
  • 7.47e3
  • 1.49e4
75.00
  • 75.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
9.57e3
  • 9.57e3
67.97
  • 67.97
AEIR
  • AEIR
UBERON:0001133cardiac muscle tissue
  • ZFS:0000033Hatching:Long-pec
9.96e3
  • 9.96e3
66.67
  • 66.67
AEIR
  • AEIR
UBERON:0002349myocardium
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000033Hatching:Long-pec
9.96e3
  • 9.96e3
  • 9.96e3
  • 1.49e4
  • 1.49e4
66.67
  • 66.67
  • 66.67
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005498primitive heart tube
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000028Segmentation:26+ somites
1.10e4
  • 1.10e4
  • 1.38e4
63.32
  • 63.32
  • 53.83
AEIR
  • AEIR
  • AEIR
UBERON:0003084heart primordium
  • ZFS:0000027Segmentation:20-25 somites
1.12e4
  • 1.12e4
62.49
  • 62.49
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
1.22e4
  • 1.22e4
  • 1.55e4
  • 1.62e4
  • 2.02e4
  • 2.32e4
59.15
  • 59.15
  • 47.97
  • 45.91
  • 32.24
  • 22.27
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • ZFS:0000033Hatching:Long-pec
1.31e4
  • 1.31e4
56.24
  • 56.24
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.38e4
  • 1.38e4
53.79
  • 53.79
AEIR
  • AEIR
UBERON:0007278presumptive sinus venosus
  • ZFS:0000029Pharyngula:Prim-5
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:2002229presumptive atrium primitive heart tube
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
1.49e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
ZFA:0005490myocardial precursor (Danio)
  • ZFS:0000027Segmentation:20-25 somites
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.62e4
  • 1.62e4
  • 1.90e4
45.88
  • 45.88
  • 36.24
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.87e4
  • 1.87e4
37.27
  • 37.27
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.25e4
  • 2.25e4
24.64
  • 24.64
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs

Orthology information comes from OMA : ENSDARG00000090637.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata16 genesCompare expression
Bilateria17 genesCompare expression
Eukaryota21 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000090637.

Cross-references

EnsemblENSDARG00000090637 (myh6)
ZFINZDB-GENE-031112-1 (myh6)
EMBLCU530419
Uniprot/SPTREMBLB8JLS3, B8JLS3_DANRE

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