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D. rerio Gene: si:ch73-29c22.1 - ENSDARG00000090948 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000090948
Namesi:ch73-29c22.1
Descriptionsi:ch73-29c22.1 [Source:ZFIN;Acc:ZDB-GENE-091204-309]
OrganismDanio rerio (zebrafish)
Orthologs(s)9 orthologs
Paralog(s)10 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.15e4
  • 1.15e4
  • 2.05e4
61.50
  • 61.50
  • 31.23
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.01
  • 60.01
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
1.40e4
  • 1.40e4
  • 2.77e4
53.22
  • 53.22
  • 7.41
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.72e4
  • 1.72e4
42.43
  • 42.43
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.74e4
  • 1.74e4
41.87
  • 41.87
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.81e4
  • 1.81e4
39.47
  • 39.47
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.06e4
  • 2.06e4
31.11
  • 31.11
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.24e4
  • 2.24e4
24.88
  • 24.88
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.27e4
  • 2.27e4
23.92
  • 23.92
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.32e4
  • 2.32e4
22.26
  • 22.26
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Paralogy information comes from OMA : ENSDARG00000090948.

Cross-references

EnsemblENSDARG00000090948 (si:ch73-29c22.1)
ZFINZDB-GENE-091204-309 (si:ch73-29c22.1)
EMBLCU466271, CU694955
Uniprot/SPTREMBLE9QH26, E9QH26_DANRE

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