D. rerio Gene: si:rp71-84d9.1 - ENSDARG00000091585 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000091585
Namesi:rp71-84d9.1
Descriptionsi:rp71-84d9.1 [Source:ZFIN;Acc:ZDB-GENE-131121-579]
OrganismDanio rerio (zebrafish)
Orthologs(s)6 orthologs
Paralog(s)439 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
7.20e3
  • 7.20e3
75.90
  • 75.90
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
65.78
  • 65.78
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.41e4
  • 1.41e4
52.80
  • 52.80
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.47e4
  • 1.47e4
50.76
  • 50.76
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.53e4
  • 1.53e4
48.65
  • 48.65
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.62e4
  • 1.62e4
45.76
  • 45.76
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.72e4
  • 1.72e4
42.45
  • 42.45
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.72e4
  • 1.72e4
42.44
  • 42.44
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.85e4
  • 1.85e4
37.91
  • 37.91
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.86e4
  • 1.86e4
  • 2.06e4
37.63
  • 37.63
  • 31.11
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
1.97e4
  • 1.97e4
  • 2.03e4
  • 2.09e4
  • 2.15e4
33.91
  • 33.91
  • 32.16
  • 29.96
  • 27.90
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.99e4
  • 1.99e4
33.51
  • 33.51
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
2.18e4
  • 2.18e4
  • 2.19e4
27.07
  • 27.07
  • 26.71
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.19e4
  • 2.19e4
26.55
  • 26.55
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.27e4
  • 2.27e4
24.00
  • 24.00
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.36e4
  • 2.36e4
21.04
  • 21.04
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eukaryota439 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000091585.

Cross-references

EnsemblENSDARG00000091585 (si:rp71-84d9.1)
ZFINZDB-GENE-131121-579 (si:rp71-84d9.1)
EMBLBX649415
Uniprot/SPTREMBLE7F9X4, E7F9X4_DANRE, E7FE81, E7FE81_DANRE, X1WEK9, X1WEK9_DANRE, X1WEW5, X1WEW5_DANRE

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