D. rerio Gene: si:dkey-147f3.8 - ENSDARG00000092166 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000092166
Namesi:dkey-147f3.8
Descriptionsi:dkey-147f3.8 [Source:ZFIN;Acc:ZDB-GENE-061009-32]
OrganismDanio rerio (zebrafish)
Orthologs(s)46 orthologs
Paralog(s)8 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.24e3
  • 1.24e3
95.84
  • 95.84
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.53e3
  • 1.53e3
94.89
  • 94.89
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.80e3
  • 1.80e3
93.99
  • 93.99
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
3.13e3
  • 3.13e3
89.53
  • 89.53
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
3.47e3
  • 3.47e3
  • 5.19e3
88.38
  • 88.38
  • 82.63
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
3.73e3
  • 3.73e3
  • 8.95e3
87.51
  • 87.51
  • 70.03
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
4.03e3
  • 4.03e3
86.49
  • 86.49
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.63e3
  • 4.63e3
84.50
  • 84.50
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
4.81e3
  • 4.81e3
83.90
  • 83.90
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
5.51e3
  • 5.51e3
81.54
  • 81.54
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
6.30e3
  • 6.30e3
78.89
  • 78.89
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
6.33e3
  • 6.33e3
78.82
  • 78.82
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.56e3
  • 6.56e3
78.05
  • 78.05
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
6.78e3
  • 6.78e3
  • 7.21e3
  • 7.58e3
  • 8.14e3
  • 8.61e3
77.28
  • 77.28
  • 75.85
  • 74.63
  • 72.74
  • 71.16
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
7.46e3
  • 7.46e3
75.04
  • 75.04
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
7.85e3
  • 7.85e3
73.70
  • 73.70
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
7.86e3
  • 7.86e3
  • 9.60e3
73.70
  • 73.70
  • 67.86
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
8.48e3
  • 8.48e3
71.61
  • 71.61
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
9.71e3
  • 9.71e3
67.49
  • 67.49
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
9.85e3
  • 9.85e3
  • 1.04e4
67.01
  • 67.01
  • 65.14
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
60.78
  • 60.78
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.31e4
  • 1.31e4
56.15
  • 56.15
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
1.35e4
  • 1.35e4
  • 1.48e4
54.85
  • 54.85
  • 50.49
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.55e4
  • 1.55e4
48.07
  • 48.07
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi19 species46 genesCompare expression

Orthology information comes from OMA : ENSDARG00000092166.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Euteleostomi8 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000092166.

Cross-references

EnsemblENSDARG00000092166 (si:dkey-147f3.8)
ZFINZDB-GENE-061009-32 (si:dkey-147f3.8)
EMBLAL732515, CR356239
Uniprot/SPTREMBLF1QC49, F1QC49_DANRE, F1R0B1, F1R0B1_DANRE, F1R5J5, F1R5J5_DANRE

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