D. rerio Gene: si:dkey-21e2.4 - ENSDARG00000092532 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000092532
Namesi:dkey-21e2.4
Descriptionsi:dkey-21e2.4 [Source:ZFIN;Acc:ZDB-GENE-050208-538]
OrganismDanio rerio (zebrafish)
Paralog(s)64 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
5.90e3
  • 5.90e3
  • 1.90e4
80.25
  • 80.25
  • 36.25
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
5.94e3
  • 5.94e3
  • 2.67e4
80.10
  • 80.10
  • 10.60
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.97e3
  • 5.97e3
80.01
  • 80.01
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
7.08e3
  • 7.08e3
76.31
  • 76.31
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
7.22e3
  • 7.22e3
75.83
  • 75.83
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
8.72e3
  • 8.72e3
70.82
  • 70.82
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
8.74e3
  • 8.74e3
70.75
  • 70.75
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
66.09
  • 66.09
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
65.66
  • 65.66
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
1.26e4
  • 1.26e4
  • 1.92e4
  • 2.11e4
  • 2.18e4
57.78
  • 57.78
  • 35.71
  • 29.21
  • 27.01
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.31e4
  • 1.31e4
56.00
  • 56.00
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.40e4
  • 1.40e4
53.18
  • 53.18
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.73e4
  • 1.73e4
42.19
  • 42.19
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.74e4
  • 1.74e4
41.58
  • 41.58
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.83e4
  • 1.83e4
  • 2.03e4
38.56
  • 38.56
  • 31.94
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Otophysi20 genesCompare expression
Opisthokonta64 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000092532.

Cross-references

EnsemblENSDARG00000092532 (si:dkey-21e2.4)
ZFINZDB-GENE-050208-538 (si:dkey-21e2.4)
Uniprot/SPTREMBLF1QMG9, F1QMG9_DANRE

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