D. rerio Gene: ppp3r1a - ENSDARG00000092659 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000092659
Nameppp3r1a
Descriptionprotein phosphatase 3, regulatory subunit B, alpha a [Source:ZFIN;Acc:ZDB-GENE-081113-3]
OrganismDanio rerio (zebrafish)
Synonym(s)canb1, ppp3r1, si:ch211-274c22.8
Orthologs(s)24 orthologs
Paralog(s)49 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
587
  • 587
98.04
  • 98.04
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
606
  • 606
97.98
  • 97.98
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
1.01e3
  • 1.01e3
  • 1.33e3
  • 2.98e3
  • 6.08e3
  • 6.42e3
96.61
  • 96.61
  • 95.54
  • 90.02
  • 79.64
  • 78.50
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.23e3
  • 1.23e3
  • 4.88e3
95.88
  • 95.88
  • 83.67
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.32e3
  • 2.32e3
92.24
  • 92.24
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
2.55e3
  • 2.55e3
91.46
  • 91.46
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
3.03e3
  • 3.03e3
  • 5.73e3
89.85
  • 89.85
  • 80.80
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
3.29e3
  • 3.29e3
89.00
  • 89.00
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
3.58e3
  • 3.58e3
88.02
  • 88.02
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
3.72e3
  • 3.72e3
87.56
  • 87.56
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
4.00e3
  • 4.00e3
86.61
  • 86.61
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
4.66e3
  • 4.66e3
84.40
  • 84.40
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
4.76e3
  • 4.76e3
84.07
  • 84.07
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
5.53e3
  • 5.53e3
81.49
  • 81.49
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
5.66e3
  • 5.66e3
  • 5.84e3
81.05
  • 81.05
  • 80.44
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
5.96e3
  • 5.96e3
80.04
  • 80.04
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.05e3
  • 6.05e3
79.75
  • 79.75
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
6.19e3
  • 6.19e3
79.29
  • 79.29
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
6.31e3
  • 6.31e3
  • 8.32e3
78.88
  • 78.88
  • 72.13
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
7.57e3
  • 7.57e3
74.67
  • 74.67
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
7.82e3
  • 7.82e3
  • 7.89e3
73.83
  • 73.83
  • 73.58
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
8.44e3
  • 8.44e3
71.74
  • 71.74
AEIR
  • AEIR
UBERON:0000203pallium
  • ZFS:0000035Larval:Protruding-mouth
9.96e3
  • 9.96e3
66.67
  • 66.67
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.72
  • 64.72
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.44
  • 64.44
AEIR
  • AEIR
UBERON:0001893telencephalon
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000029Pharyngula:Prim-5
1.07e4
  • 1.07e4
  • 1.31e4
64.28
  • 64.28
  • 56.22
AEIR
  • AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • ZFS:0000035Larval:Protruding-mouth
1.12e4
  • 1.12e4
62.50
  • 62.50
AEIR
  • AEIR
UBERON:0002037cerebellum
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000029Pharyngula:Prim-5
1.17e4
  • 1.17e4
  • 1.24e4
  • 1.25e4
60.70
  • 60.70
  • 58.33
  • 58.31
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001945superior colliculus
  • ZFS:0000035Larval:Protruding-mouth
1.24e4
  • 1.24e4
58.32
  • 58.32
AEIR
  • AEIR
UBERON:0001905pineal body
  • ZFS:0000035Larval:Protruding-mouth
1.28e4
  • 1.28e4
57.14
  • 57.14
AEIR
  • AEIR
UBERON:0001894diencephalon
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000033Hatching:Long-pec
1.31e4
  • 1.31e4
  • 1.36e4
  • 1.41e4
56.22
  • 56.22
  • 54.53
  • 52.75
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001891midbrain
  • ZFS:0000029Pharyngula:Prim-5
1.34e4
  • 1.34e4
54.97
  • 54.97
AEIR
  • AEIR
UBERON:0003936postoptic commissure
  • ZFS:0000029Pharyngula:Prim-5
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi12 species12 genesCompare expression
Bilateria19 species24 genesCompare expression

Orthology information comes from OMA : ENSDARG00000092659.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Otophysi1 geneCompare expression
Opisthokonta3 genesCompare expression
Eukaryota49 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000092659.

Cross-references

EnsemblENSDARG00000092659 (ppp3r1a)
ZFINZDB-GENE-081113-3 (ppp3r1a)
EMBLBX323887, KT023302
Uniprot/SPTREMBLE9QG20, E9QG20_DANRE

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