D. rerio Gene: si:dkey-21e2.3 - ENSDARG00000092814 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000092814
Namesi:dkey-21e2.3
Descriptionsi:dkey-21e2.3 [Source:ZFIN;Acc:ZDB-GENE-050208-618]
OrganismDanio rerio (zebrafish)
Paralog(s)64 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.05e4
  • 1.05e4
  • 1.19e4
64.82
  • 64.82
  • 60.18
AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.17e4
  • 1.17e4
60.83
  • 60.83
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
1.20e4
  • 1.20e4
  • 1.77e4
59.89
  • 59.89
  • 40.66
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.32e4
  • 1.32e4
55.80
  • 55.80
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000022Gastrula:Bud
1.32e4
  • 1.32e4
  • 1.75e4
  • 2.34e4
55.75
  • 55.75
  • 41.42
  • 21.79
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
1.42e4
  • 1.42e4
  • 1.43e4
  • 1.50e4
  • 1.78e4
  • 2.46e4
  • 2.61e4
  • 2.77e4
  • 2.87e4
52.47
  • 52.47
  • 52.00
  • 49.74
  • 40.54
  • 17.58
  • 12.74
  • 7.41
  • 3.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
1.54e4
  • 1.54e4
  • 1.67e4
  • 1.74e4
  • 1.77e4
  • 1.77e4
  • 1.78e4
  • 1.78e4
  • 1.78e4
  • 1.79e4
  • 1.81e4
48.35
  • 48.35
  • 43.99
  • 41.60
  • 40.64
  • 40.62
  • 40.56
  • 40.55
  • 40.38
  • 40.18
  • 39.42
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.55e4
  • 1.55e4
  • 2.34e4
48.11
  • 48.11
  • 21.81
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.59e4
  • 1.59e4
  • 1.89e4
  • 1.91e4
46.90
  • 46.90
  • 36.67
  • 36.03
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.61e4
  • 1.61e4
45.96
  • 45.96
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
2.25e4
  • 2.25e4
24.64
  • 24.64
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.37e4
  • 2.37e4
20.72
  • 20.72
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Otophysi20 genesCompare expression
Opisthokonta64 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000092814.

Cross-references

EnsemblENSDARG00000092814 (si:dkey-21e2.3)
ZFINZDB-GENE-050208-618 (si:dkey-21e2.3)
EMBLBX927243
Uniprot/SPTREMBLQ1LUR2, Q1LUR2_DANRE

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