D. rerio Gene: si:dkey-201l21.2 - ENSDARG00000092908 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000092908
Namesi:dkey-201l21.2
Descriptionsi:dkey-201l21.2 [Source:ZFIN;Acc:ZDB-GENE-060531-97]
OrganismDanio rerio (zebrafish)
Paralog(s)439 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.50e3
  • 1.50e3
94.99
  • 94.99
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.28
  • 64.28
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
55.19
  • 55.19
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.60
  • 40.60
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.27e4
  • 2.27e4
23.85
  • 23.85
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.54e4
  • 2.54e4
14.89
  • 14.89
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
2.55e4
  • 2.55e4
14.47
  • 14.47
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Otophysi1 geneCompare expression
Eukaryota439 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000092908.

Cross-references

EnsemblENSDARG00000092908 (si:dkey-201l21.2)
ZFINZDB-GENE-060531-97 (si:dkey-201l21.2)
EMBLCR855393
Uniprot/SPTREMBLF1QJR4, F1QJR4_DANRE, F1QW23, F1QW23_DANRE

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