D. rerio Gene: zgc:136461 - ENSDARG00000093844 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000093844
Namezgc:136461
Descriptionzgc:136461 [Source:ZFIN;Acc:ZDB-GENE-060519-7]
OrganismDanio rerio (zebrafish)
Orthologs(s)29 orthologs
Paralog(s)64 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
246
  • 246
99.18
  • 99.18
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
382
  • 382
98.72
  • 98.72
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
398
  • 398
98.67
  • 98.67
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
963
  • 963
  • 2.87e3
  • 3.84e3
  • 4.80e3
  • 1.47e4
  • 1.49e4
96.78
  • 96.78
  • 90.40
  • 87.15
  • 83.91
  • 50.90
  • 50.25
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.38e3
  • 1.38e3
95.39
  • 95.39
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
2.54e3
  • 2.54e3
  • 9.04e3
  • 1.08e4
91.51
  • 91.51
  • 69.74
  • 63.80
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
4.56e3
  • 4.56e3
84.74
  • 84.74
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
9.38e3
  • 9.38e3
68.60
  • 68.60
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
  • 2.06e4
60.11
  • 60.11
  • 30.95
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.29e4
  • 1.29e4
56.88
  • 56.88
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
50.08
  • 50.08
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.55e4
  • 1.55e4
  • 1.89e4
48.11
  • 48.11
  • 36.73
AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.77
  • 40.77
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.90e4
  • 1.90e4
36.54
  • 36.54
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.12e4
  • 2.12e4
28.86
  • 28.86
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.13e4
  • 2.13e4
28.61
  • 28.61
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.42e4
  • 2.42e4
18.87
  • 18.87
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.48e4
  • 2.48e4
16.86
  • 16.86
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Clupeocephala1 geneCompare expression
Vertebrata3 genesCompare expression
Opisthokonta64 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000093844.

Cross-references

EnsemblENSDARG00000093844 (zgc:136461)
ZFINZDB-GENE-060519-7 (zgc:136461)
EMBLBC129301, CR356247
Uniprot/SPTREMBLA2VD37, A2VD37_DANRE

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