D. rerio Gene: si:rp71-45g20.11 - ENSDARG00000094291 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000094291
Namesi:rp71-45g20.11
Descriptionsi:rp71-45g20.11 [Source:ZFIN;Acc:ZDB-GENE-070912-708]
OrganismDanio rerio (zebrafish)
Paralog(s)17 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.27
  • 64.27
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.59e4
  • 1.59e4
46.91
  • 46.91
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.61e4
  • 1.61e4
45.96
  • 45.96
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.85e4
  • 1.85e4
  • 2.09e4
38.17
  • 38.17
  • 29.99
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.08e4
  • 2.08e4
30.21
  • 30.21
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
2.12e4
  • 2.12e4
  • 2.17e4
  • 2.18e4
  • 2.53e4
29.06
  • 29.06
  • 27.44
  • 27.05
  • 15.35
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
2.16e4
  • 2.16e4
  • 2.42e4
27.77
  • 27.77
  • 18.80
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.32e4
  • 2.32e4
22.17
  • 22.17
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.40e4
  • 2.40e4
19.72
  • 19.72
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Clupeocephala17 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000094291.

Cross-references

EnsemblENSDARG00000094291 (si:rp71-45g20.11)
ZFINZDB-GENE-070912-708 (si:rp71-45g20.11)
EMBLBX511265
Uniprot/SPTREMBLA8WHX5, A8WHX5_DANRE, A8WHX8, A8WHX8_DANRE, E9QCK1, E9QCK1_DANRE

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