Gene: si:ch211-132b12.2 - ENSDARG00000094946 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000094946
Name	si:ch211-132b12.2
Description	si:ch211-132b12.2 [Source:ZFIN;Acc:ZDB-GENE-050420-178]
Organism	Danio rerio (zebrafish)
Paralog(s)	29 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0002113	kidney	[+] 1 stage UBERON:0000066fully formed stage	3.12e3 3.12e3	89.55 89.55	AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	4.12e3 4.12e3	86.19 86.19	AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	6.55e3 6.55e3	78.07 78.07	AEIR AEIR
UBERON:0002385	muscle tissue	[+] 1 stage UBERON:0000066fully formed stage	1.05e4 1.05e4	64.94 64.94	AEIR AEIR
CL:0000094	granulocyte	[+] 1 stage UBERON:0000066fully formed stage	1.59e4 1.59e4	46.88 46.88	AEIR AEIR
UBERON:0000922	embryo	[+] 4 stages UBERON:0004707pharyngula stage ZFS:0000029Pharyngula:Prim-5 UBERON:0000068embryo stage ZFS:0000037Larval:Day 5	1.60e4 1.60e4 1.70e4 1.77e4 2.15e4	46.26 46.26 42.94 40.87 28.03	AEIR AEIR AEIR AEIR AEIR
UBERON:0002548	larva	[+] 2 stages UBERON:0000069larval stage ZFS:0000037Larval:Day 5	1.69e4 1.69e4 1.76e4	43.43 43.43 40.92	AEIR AEIR AEIR
UBERON:0006860	swim bladder	[+] 1 stage UBERON:0000066fully formed stage	1.89e4 1.89e4	36.66 36.66	AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	2.00e4 2.00e4	32.95 32.95	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	2.24e4 2.24e4	24.96 24.96	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Otophysi	4 genes ENSDARG00000061480 si:ch211-132b12.1 ENSDARG00000068363 si:ch211-132b12.3 ENSDARG00000068372 zgc:158427 ENSDARG00000094546 si:ch211-132b12.6	Compare expression	[+]
Eukaryota	29 genes ENSDARG00000000730 slc6a13 ENSDARG00000001354 slc6a13l ENSDARG00000002405 si:ch211-225b11.1 ENSDARG00000004219 SLC6A3 ENSDARG00000012534 slc6a6a ENSDARG00000016141 slc6a2 ENSDARG00000018534 slc6a9 ENSDARG00000018621 slc6a19a.1 ENSDARG00000029866 slc6a14 ENSDARG00000030006 SLC6A7 ENSDARG00000039647 slc6a1b ENSDARG00000041205 slc6a1l ENSDARG00000043646 slc6a8 ENSDARG00000045944 slc6a1a ENSDARG00000046091 si:ch211-283g2.1 ENSDARG00000057017 slc6a4b ENSDARG00000061165 slc6a4a ENSDARG00000061480 si:ch211-132b12.1 ENSDARG00000062821 slc6a15 ENSDARG00000067567 SLC6A13 ENSDARG00000068363 si:ch211-132b12.3 ENSDARG00000068372 zgc:158427 ENSDARG00000068387 slc6a18 ENSDARG00000071235 si:ch211-117c9.5 ENSDARG00000074002 slc6a11a ENSDARG00000087981 slc6a11b ENSDARG00000091560 slc6a19a.2 ENSDARG00000094546 si:ch211-132b12.6 ENSDARG00000098438 slc6a6b	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000094946.

Cross-references

Ensembl	ENSDARG00000094946 (si:ch211-132b12.2)
ZFIN	ZDB-GENE-050420-178 (si:ch211-132b12.2)
EMBL	BX664607
Uniprot/SPTREMBL	Q1LVJ0, Q1LVJ0_DANRE