D. rerio Gene: si:dkey-78l4.2 - ENSDARG00000095384 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000095384
Namesi:dkey-78l4.2
Descriptionsi:dkey-78l4.2 [Source:ZFIN;Acc:ZDB-GENE-060503-647]
OrganismDanio rerio (zebrafish)
Paralog(s)64 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000033head
  • UBERON:0000066fully formed stage
9.27e3
  • 9.27e3
68.96
  • 68.96
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.94
  • 64.94
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.25e4
  • 1.25e4
58.10
  • 58.10
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.29e4
  • 1.29e4
56.89
  • 56.89
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.45e4
  • 1.45e4
51.56
  • 51.56
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.54e4
  • 1.54e4
48.56
  • 48.56
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.56e4
  • 1.56e4
47.86
  • 47.86
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.64e4
  • 1.64e4
  • 2.88e4
45.08
  • 45.08
  • 3.49
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.87e4
  • 1.87e4
  • 2.13e4
37.28
  • 37.28
  • 28.52
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.29e4
  • 2.29e4
23.34
  • 23.34
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
2.35e4
  • 2.35e4
21.48
  • 21.48
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Otophysi20 genesCompare expression
Opisthokonta64 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000095384.

Cross-references

EnsemblENSDARG00000095384 (si:dkey-78l4.2)
ZFINZDB-GENE-060503-647 (si:dkey-78l4.2)
EMBLBX936298
Uniprot/SPTREMBLF1QGL6, F1QGL6_DANRE, F1R3J2, F1R3J2_DANRE, X1WD20, X1WD20_DANRE

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