D. rerio Gene: si:ch211-131e11.21 - ENSDARG00000095739 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000095739
Namesi:ch211-131e11.21
Descriptionsi:ch211-131e11.21 [Source:ZFIN;Acc:ZDB-GENE-070912-55]
OrganismDanio rerio (zebrafish)
Paralog(s)18 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.89e3
  • 5.89e3
80.28
  • 80.28
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
9.84e3
  • 9.84e3
67.06
  • 67.06
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
1.35e4
  • 1.35e4
54.65
  • 54.65
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.37e4
  • 1.37e4
54.14
  • 54.14
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
1.43e4
  • 1.43e4
  • 2.03e4
  • 2.04e4
  • 2.39e4
52.13
  • 52.13
  • 32.03
  • 31.67
  • 19.81
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.45e4
  • 1.45e4
51.43
  • 51.43
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
50.22
  • 50.22
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.60e4
  • 1.60e4
46.52
  • 46.52
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
2.08e4
  • 2.08e4
  • 2.18e4
30.21
  • 30.21
  • 27.15
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
2.11e4
  • 2.11e4
29.31
  • 29.31
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.18e4
  • 2.18e4
27.11
  • 27.11
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Otophysi18 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000095739.

Cross-references

EnsemblENSDARG00000095739 (si:ch211-131e11.21)
ZFINZDB-GENE-070912-55 (si:ch211-131e11.21)
EMBLCR790363
Uniprot/SPTREMBLF1Q8X3, F1Q8X3_DANRE

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