Gene: si:ch211-131e11.21 - ENSDARG00000095739 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000095739
Name	si:ch211-131e11.21
Description	si:ch211-131e11.21 [Source:ZFIN;Acc:ZDB-GENE-070912-55]
Organism	Danio rerio (zebrafish)
Paralog(s)	18 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	5.89e3 5.89e3	80.28 80.28	AEIR AEIR
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	9.84e3 9.84e3	67.06 67.06	AEIR AEIR
UBERON:0000033	head	[+] 1 stage UBERON:0000066fully formed stage	1.35e4 1.35e4	54.65 54.65	AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	1.37e4 1.37e4	54.14 54.14	AEIR AEIR
UBERON:0000922	embryo	[+] 4 stages ZFS:0000033Hatching:Long-pec ZFS:0000037Larval:Day 5 UBERON:0000068embryo stage UBERON:0004707pharyngula stage	1.43e4 1.43e4 2.03e4 2.04e4 2.39e4	52.13 52.13 32.03 31.67 19.81	AEIR AEIR AEIR AEIR AEIR
UBERON:0006860	swim bladder	[+] 1 stage UBERON:0000066fully formed stage	1.45e4 1.45e4	51.43 51.43	AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	1.49e4 1.49e4	50.22 50.22	AEIR AEIR
UBERON:0001630	muscle organ	[+] 1 stage UBERON:0000066fully formed stage	1.60e4 1.60e4	46.52 46.52	AEIR AEIR
UBERON:0002548	larva	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000069larval stage	2.08e4 2.08e4 2.18e4	30.21 30.21 27.15	AEIR AEIR AEIR
UBERON:0000948	heart	[+] 1 stage UBERON:0000066fully formed stage	2.11e4 2.11e4	29.31 29.31	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	2.18e4 2.18e4	27.11 27.11	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Otophysi	18 genes ENSDARG00000035088 si:ch211-254c8.3 ENSDARG00000052900 zgc:153642 ENSDARG00000056443 zgc:152753 ENSDARG00000059786 CABZ01059408.1 ENSDARG00000063108 CABZ01059392.1 ENSDARG00000074069 zgc:171452 ENSDARG00000076573 si:dkey-88j15.3 ENSDARG00000078832 si:dkey-73p2.3 ENSDARG00000079245 si:dkey-73p2.2 ENSDARG00000079471 si:dkey-88j15.4 ENSDARG00000086365 BX004816.3 ENSDARG00000088561 CR450729.1 ENSDARG00000093029 si:dkey-175d9.2 ENSDARG00000093082 CABZ01059412.1 ENSDARG00000095076 si:dkey-73p2.3 ENSDARG00000098993 CABZ01059421.1 ENSDARG00000099508 CABZ01049362.1 ENSDARG00000103058 zgc:172091	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000095739.

Cross-references

Ensembl	ENSDARG00000095739 (si:ch211-131e11.21)
ZFIN	ZDB-GENE-070912-55 (si:ch211-131e11.21)
EMBL	CR790363
Uniprot/SPTREMBL	F1Q8X3, F1Q8X3_DANRE