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D. rerio Gene: myha - ENSDARG00000095930 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000095930
Namemyha
Descriptionmyosin, heavy chain a [Source:ZFIN;Acc:ZDB-GENE-060531-50]
OrganismDanio rerio (zebrafish)
Synonym(s)fmyhc2.3, si:ch211-251m3.3
Orthologs(s)82 orthologs
Paralog(s)21 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
279
  • 279
99.07
  • 99.07
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
391
  • 391
98.69
  • 98.69
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
473
  • 473
98.42
  • 98.42
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.08e3
  • 1.08e3
96.38
  • 96.38
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.07e3
  • 2.07e3
93.06
  • 93.06
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
2.13e3
  • 2.13e3
  • 7.15e3
  • 9.44e3
  • 1.69e4
  • 1.89e4
92.86
  • 92.86
  • 76.07
  • 68.40
  • 43.25
  • 36.63
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.75e3
  • 5.75e3
80.75
  • 80.75
AEIR
  • AEIR
UBERON:0001601extra-ocular muscle
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000034Hatching:Pec-fin
7.47e3
  • 7.47e3
  • 1.49e4
75.00
  • 75.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:2007051ventral interhyoideus
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000034Hatching:Pec-fin
7.47e3
  • 7.47e3
  • 1.49e4
75.00
  • 75.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:2007052hyohyoideus
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000034Hatching:Pec-fin
7.47e3
  • 7.47e3
  • 1.49e4
75.00
  • 75.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000035Larval:Protruding-mouth
7.47e3
  • 7.47e3
  • 7.47e3
75.00
  • 75.00
  • 75.00
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
8.06e3
  • 8.06e3
  • 1.05e4
73.02
  • 73.02
  • 64.99
AEIR
  • AEIR
  • AEIR
UBERON:0002100trunk
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000035Larval:Protruding-mouth
8.53e3
  • 8.53e3
  • 9.96e3
  • 9.96e3
71.43
  • 71.43
  • 66.67
  • 66.67
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2002200hypobranchial muscle
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000035Larval:Protruding-mouth
1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:2007008ventral intermandibularis anterior
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000035Larval:Protruding-mouth
1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:2007048ventral intermandibularis posterior
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000035Larval:Protruding-mouth
1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.81e4
  • 1.81e4
39.49
  • 39.49
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.92e4
  • 1.92e4
35.85
  • 35.85
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
2.28e4
  • 2.28e4
23.78
  • 23.78
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi19 species72 genesCompare expression
Bilateria25 species82 genesCompare expression

Orthology information comes from OMA : ENSDARG00000095930.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Otophysi4 genesCompare expression
Neopterygii7 genesCompare expression
Chordata16 genesCompare expression
Bilateria17 genesCompare expression
Eukaryota21 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000095930.

Cross-references

EnsemblENSDARG00000095930 (myha)
ZFINZDB-GENE-060531-50 (myha)
EMBLBX510649, BX511237
Uniprot/SPTREMBLF1R6C7, F1R6C7_DANRE

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