D. rerio Gene: si:dkey-77f5.8 - ENSDARG00000096941 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000096941
Namesi:dkey-77f5.8
Descriptionsi:dkey-77f5.8 [Source:ZFIN;Acc:ZDB-GENE-131120-149]
OrganismDanio rerio (zebrafish)
Paralog(s)14 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
7.96e3
  • 7.96e3
  • 9.14e3
73.35
  • 73.35
  • 69.41
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
8.62e3
  • 8.62e3
  • 1.25e4
71.14
  • 71.14
  • 58.16
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.16e4
  • 1.16e4
61.21
  • 61.21
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
60.56
  • 60.56
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
60.38
  • 60.38
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.25e4
  • 1.25e4
58.10
  • 58.10
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.25e4
  • 1.25e4
  • 1.65e4
58.02
  • 58.02
  • 44.65
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
1.25e4
  • 1.25e4
  • 1.31e4
  • 1.38e4
  • 1.41e4
  • 1.49e4
58.01
  • 58.01
  • 56.09
  • 53.94
  • 52.74
  • 50.17
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.27e4
  • 1.27e4
57.52
  • 57.52
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.27e4
  • 1.27e4
57.31
  • 57.31
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
57.04
  • 57.04
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
57.02
  • 57.02
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.29e4
  • 1.29e4
56.87
  • 56.87
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.29e4
  • 1.29e4
  • 1.49e4
56.70
  • 56.70
  • 49.99
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
55.23
  • 55.23
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.35e4
  • 1.35e4
  • 1.47e4
54.76
  • 54.76
  • 50.87
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.37e4
  • 1.37e4
54.12
  • 54.12
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.51e4
  • 1.51e4
49.35
  • 49.35
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.53e4
  • 1.53e4
48.63
  • 48.63
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.58e4
  • 1.58e4
47.18
  • 47.18
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.62e4
  • 1.62e4
45.64
  • 45.64
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.64e4
  • 1.64e4
45.21
  • 45.21
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.68e4
  • 1.68e4
43.62
  • 43.62
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.74e4
  • 1.74e4
41.79
  • 41.79
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.86e4
  • 1.86e4
37.76
  • 37.76
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Opisthokonta14 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000096941.

Cross-references

EnsemblENSDARG00000096941 (si:dkey-77f5.8)
ZFINZDB-GENE-131120-149 (si:dkey-77f5.8)
EMBLBX000999
Uniprot/SPTREMBLX1WGU6, X1WGU6_DANRE

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