D. rerio Gene: ddx46 - ENSDARG00000099458 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000099458
Nameddx46
DescriptionDEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Source:ZFIN;Acc:ZDB-GENE-030131-667]
OrganismDanio rerio (zebrafish)
Synonym(s)fb39a03, fj67d06, wu:fb39a03, wu:fj67d06
Orthologs(s)24 orthologs
Paralog(s)439 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
617
  • 617
97.94
  • 97.94
AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
836
  • 836
  • 1.35e3
  • 1.41e3
  • 1.57e3
  • 2.23e3
  • 2.39e3
97.20
  • 97.20
  • 95.50
  • 95.28
  • 94.75
  • 92.55
  • 91.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
901
  • 901
  • 1.95e3
  • 2.22e3
  • 2.24e3
  • 2.52e3
  • 2.77e3
  • 2.88e3
  • 3.28e3
  • 4.02e3
  • 5.10e3
96.99
  • 96.99
  • 93.48
  • 92.58
  • 92.50
  • 91.58
  • 90.74
  • 90.37
  • 89.01
  • 86.55
  • 82.94
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
922
  • 922
96.92
  • 96.92
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
1.11e3
  • 1.11e3
  • 1.61e3
  • 1.74e3
  • 5.08e3
  • 5.98e3
96.30
  • 96.30
  • 94.62
  • 94.16
  • 83.00
  • 80.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.34e3
  • 1.34e3
95.53
  • 95.53
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.50e3
  • 1.50e3
94.97
  • 94.97
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.53e3
  • 1.53e3
94.90
  • 94.90
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.78e3
  • 1.78e3
94.05
  • 94.05
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.82e3
  • 1.82e3
93.91
  • 93.91
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
1.85e3
  • 1.85e3
  • 3.12e3
  • 1.12e4
  • 1.12e4
93.81
  • 93.81
  • 89.56
  • 62.50
  • 62.50
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.88e3
  • 1.88e3
93.70
  • 93.70
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
2.03e3
  • 2.03e3
  • 5.01e3
93.21
  • 93.21
  • 83.22
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.10e3
  • 2.10e3
92.96
  • 92.96
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000106zygote stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000008Blastula:128-cell
2.24e3
  • 2.24e3
  • 2.26e3
  • 2.46e3
  • 2.52e3
  • 2.76e3
  • 2.95e3
  • 2.96e3
  • 3.94e3
  • 4.50e3
  • 4.78e3
  • 4.79e3
  • 5.12e3
  • 5.83e3
  • 6.37e3
  • 6.79e3
92.50
  • 92.50
  • 92.44
  • 91.75
  • 91.58
  • 90.77
  • 90.12
  • 90.10
  • 86.82
  • 84.92
  • 84.00
  • 83.97
  • 82.86
  • 80.50
  • 78.66
  • 77.27
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.45e3
  • 2.45e3
91.82
  • 91.82
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
2.56e3
  • 2.56e3
91.45
  • 91.45
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.83e3
  • 2.83e3
90.51
  • 90.51
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.89e3
  • 2.89e3
90.34
  • 90.34
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.96e3
  • 2.96e3
90.10
  • 90.10
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
3.01e3
  • 3.01e3
  • 3.13e3
  • 3.80e3
  • 8.98e3
  • 1.12e4
89.94
  • 89.94
  • 89.51
  • 87.29
  • 69.92
  • 62.50
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
3.32e3
  • 3.32e3
  • 1.19e4
  • 1.24e4
88.90
  • 88.90
  • 60.00
  • 58.33
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
3.36e3
  • 3.36e3
  • 1.28e4
  • 1.31e4
  • 1.35e4
88.76
  • 88.76
  • 57.13
  • 56.24
  • 54.73
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
3.59e3
  • 3.59e3
87.98
  • 87.98
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
3.90e3
  • 3.90e3
86.95
  • 86.95
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
4.05e3
  • 4.05e3
  • 6.81e3
86.43
  • 86.43
  • 77.20
AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
4.18e3
  • 4.18e3
86.00
  • 86.00
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
4.36e3
  • 4.36e3
  • 5.02e3
85.41
  • 85.41
  • 83.21
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
4.56e3
  • 4.56e3
  • 5.30e3
  • 6.19e3
84.73
  • 84.73
  • 82.26
  • 79.26
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
5.16e3
  • 5.16e3
82.73
  • 82.73
AEIR
  • AEIR
UBERON:0008896post-hyoid pharyngeal arch
  • ZFS:0000036Larval:Day 4
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
9.62e3
  • 9.62e3
67.80
  • 67.80
AEIR
  • AEIR
UBERON:0005419pectoral appendage bud
  • ZFS:0000033Hatching:Long-pec
9.96e3
  • 9.96e3
66.66
  • 66.66
AEIR
  • AEIR
UBERON:0001264pancreas
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
1.12e4
  • 1.12e4
  • 1.37e4
62.50
  • 62.50
  • 54.15
AEIR
  • AEIR
  • AEIR
UBERON:2000033intermediate cell mass of mesoderm
  • ZFS:0000033Hatching:Long-pec
1.12e4
  • 1.12e4
62.50
  • 62.50
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.46e4
  • 1.46e4
51.14
  • 51.14
AEIR
  • AEIR
UBERON:0001043esophagus
  • ZFS:0000036Larval:Day 4
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0003052midbrain-hindbrain boundary
  • ZFS:0000036Larval:Day 4
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0001893telencephalon
  • ZFS:0000036Larval:Day 4
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:2001076intestinal bulb
  • ZFS:0000036Larval:Day 4
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
CL:0000037hematopoietic stem cell
  • ZFS:0000036Larval:Day 4
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0001891midbrain
  • ZFS:0000036Larval:Day 4
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0002390hematopoietic system
  • ZFS:0000035Larval:Protruding-mouth
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0018549ventral wall of dorsal aorta
  • ZFS:0000033Hatching:Long-pec
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0000017exocrine pancreas
  • ZFS:0000035Larval:Protruding-mouth
1.49e4
  • 1.49e4
49.99
  • 49.99
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi17 species18 genesCompare expression
Bilateria23 species24 genesCompare expression

Orthology information comes from OMA : ENSDARG00000099458.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Eukaryota439 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000099458.

Cross-references

EnsemblENSDARG00000099458 (ddx46)
ZFINZDB-GENE-030131-667 (ddx46)
EMBLCU302316
Uniprot/SPTREMBLF1RA00, F1RA00_DANRE, X1WFQ6, X1WFQ6_DANRE, X1WFW9, X1WFW9_DANRE, X1WGL6, X1WGL6_DANRE

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