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D. rerio Gene: zgc:163083 - ENSDARG00000099873 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000099873
Namezgc:163083
Descriptionzgc:163083 [Source:ZFIN;Acc:ZDB-GENE-070424-53]
OrganismDanio rerio (zebrafish)
Paralog(s)9 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
682
  • 682
97.72
  • 97.72
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
2.77e3
  • 2.77e3
  • 1.60e4
90.73
  • 90.73
  • 46.30
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
8.57e3
  • 8.57e3
  • 2.20e4
71.30
  • 71.30
  • 26.39
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.87e3
  • 8.87e3
70.31
  • 70.31
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
9.74e3
  • 9.74e3
67.38
  • 67.38
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
55.13
  • 55.13
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.35e4
  • 1.35e4
54.72
  • 54.72
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
1.46e4
  • 1.46e4
  • 1.93e4
51.17
  • 51.17
  • 35.43
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.51e4
  • 1.51e4
49.38
  • 49.38
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.52e4
  • 1.52e4
49.24
  • 49.24
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
1.54e4
  • 1.54e4
  • 2.31e4
  • 2.77e4
48.40
  • 48.40
  • 22.65
  • 7.41
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.63e4
  • 1.63e4
45.34
  • 45.34
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.70e4
  • 1.70e4
43.12
  • 43.12
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.78e4
  • 1.78e4
40.25
  • 40.25
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.79e4
  • 1.79e4
39.95
  • 39.95
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
2.10e4
  • 2.10e4
29.74
  • 29.74
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.33e4
  • 2.33e4
21.93
  • 21.93
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Otophysi3 genesCompare expression
Eumetazoa7 genesCompare expression
Opisthokonta9 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000099873.

Cross-references

EnsemblENSDARG00000099873 (zgc:163083)
ZFINZDB-GENE-070424-53 (zgc:163083)
EMBLBX769173
Uniprot/SPTREMBLE9QIG9, E9QIG9_DANRE, F1QJH6, F1QJH6_DANRE

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