We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

D. rerio Gene: elovl1a - ENSDARG00000099960 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000099960
Nameelovl1a
DescriptionELOVL fatty acid elongase 1a [Source:ZFIN;Acc:ZDB-GENE-041010-66]
OrganismDanio rerio (zebrafish)
Synonym(s)elovl1, zgc:103538
Paralog(s)11 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
900
  • 900
  • 4.78e3
96.99
  • 96.99
  • 83.98
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
954
  • 954
96.81
  • 96.81
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
2.43e3
  • 2.43e3
  • 5.43e3
91.86
  • 91.86
  • 81.82
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.97e3
  • 2.97e3
90.05
  • 90.05
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
3.26e3
  • 3.26e3
  • 6.40e3
  • 8.40e3
  • 9.89e3
  • 1.50e4
89.07
  • 89.07
  • 78.57
  • 71.89
  • 66.89
  • 49.68
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
3.47e3
  • 3.47e3
  • 1.12e4
  • 1.52e4
88.40
  • 88.40
  • 62.50
  • 49.17
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
3.89e3
  • 3.89e3
86.99
  • 86.99
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
4.67e3
  • 4.67e3
84.38
  • 84.38
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
4.69e3
  • 4.69e3
84.29
  • 84.29
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
5.68e3
  • 5.68e3
81.00
  • 81.00
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.68e3
  • 5.68e3
80.98
  • 80.98
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
5.93e3
  • 5.93e3
80.14
  • 80.14
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
6.43e3
  • 6.43e3
78.48
  • 78.48
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
6.82e3
  • 6.82e3
77.16
  • 77.16
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
7.03e3
  • 7.03e3
  • 7.47e3
  • 7.97e3
  • 8.22e3
76.46
  • 76.46
  • 74.99
  • 73.32
  • 72.48
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000024Segmentation:5-9 somites
7.03e3
  • 7.03e3
76.46
  • 76.46
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
7.09e3
  • 7.09e3
76.28
  • 76.28
AEIR
  • AEIR
UBERON:0000061anatomical structure
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000019Gastrula:Shield
7.47e3
  • 7.47e3
  • 1.12e4
75.00
  • 75.00
  • 62.50
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
7.47e3
  • 7.47e3
  • 1.06e4
  • 1.24e4
75.00
  • 75.00
  • 64.45
  • 58.33
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006859swim bladder bud
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
7.47e3
  • 7.47e3
  • 1.12e4
75.00
  • 75.00
  • 62.50
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
7.87e3
  • 7.87e3
73.64
  • 73.64
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
8.64e3
  • 8.64e3
  • 1.23e4
71.06
  • 71.06
  • 58.80
AEIR
  • AEIR
  • AEIR
UBERON:0007383enveloping layer of ectoderm
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
9.51e3
  • 9.51e3
  • 9.51e3
  • 9.96e3
  • 1.05e4
  • 1.05e4
  • 1.05e4
68.17
  • 68.17
  • 68.17
  • 66.66
  • 64.99
  • 64.99
  • 64.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001042chordate pharynx
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000035Larval:Protruding-mouth
9.71e3
  • 9.71e3
  • 1.15e4
  • 1.15e4
  • 1.16e4
  • 1.49e4
  • 1.49e4
67.48
  • 67.48
  • 61.53
  • 61.53
  • 61.09
  • 50.00
  • 49.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.10e4
  • 1.10e4
  • 1.27e4
63.01
  • 63.01
  • 57.53
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.11e4
  • 1.11e4
62.80
  • 62.80
AEIR
  • AEIR
UBERON:0001637artery
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
1.12e4
  • 1.12e4
  • 1.12e4
  • 1.15e4
62.49
  • 62.49
  • 62.49
  • 61.53
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
59.95
  • 59.95
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
55.26
  • 55.26
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.55e4
  • 1.55e4
48.12
  • 48.12
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.60e4
  • 1.60e4
46.43
  • 46.43
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Opisthokonta11 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000099960.

Cross-references

EnsemblENSDARG00000099960 (elovl1a)
ZFINZDB-GENE-041010-66 (elovl1a)
EMBLBC083417, BX323588
Uniprot/SPTREMBLA5PMD4, A5PMD4_DANRE, Q5XJ87, Q5XJ87_DANRE

Do not show this banner again