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D. rerio Gene: slc8a2b - ENSDARG00000100592 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000100592
Nameslc8a2b
Descriptionsolute carrier family 8 (sodium/calcium exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-050419-209]
OrganismDanio rerio (zebrafish)
Synonym(s)ncx2b, si:dkeyp-109h9.1
Orthologs(s)22 orthologs
Paralog(s)6 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
6.25e3
  • 6.25e3
79.07
  • 79.07
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.25e4
  • 1.25e4
58.23
  • 58.23
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.37e4
  • 1.37e4
  • 1.47e4
54.25
  • 54.25
  • 50.81
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
1.38e4
  • 1.38e4
  • 1.76e4
  • 2.14e4
  • 2.22e4
  • 2.25e4
53.68
  • 53.68
  • 41.09
  • 28.32
  • 25.63
  • 24.66
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.42e4
  • 1.42e4
52.48
  • 52.48
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.45e4
  • 1.45e4
51.39
  • 51.39
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.45e4
  • 1.45e4
  • 2.03e4
51.31
  • 51.31
  • 32.18
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
1.68e4
  • 1.68e4
43.90
  • 43.90
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.02e4
  • 2.02e4
32.45
  • 32.45
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
2.02e4
  • 2.02e4
  • 2.21e4
32.21
  • 32.21
  • 25.90
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.03e4
  • 2.03e4
31.99
  • 31.99
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.04e4
  • 2.04e4
31.80
  • 31.80
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.07e4
  • 2.07e4
30.56
  • 30.56
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.33e4
  • 2.33e4
21.85
  • 21.85
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
2.44e4
  • 2.44e4
18.33
  • 18.33
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi14 species14 genesCompare expression
Bilateria21 species22 genesCompare expression

Orthology information comes from OMA : ENSDARG00000100592.

Paralogs (same species)

Paralogy information comes from OMA : ENSDARG00000100592.

Cross-references

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