Gene: slc27a2b - ENSDARG00000100731 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000100731
Name	slc27a2b
Description	solute carrier family 27 (fatty acid transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-081104-49]
Organism	Danio rerio (zebrafish)
Synonym(s)	si:dkey-147f23.1
Paralog(s)	7 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	748 748	97.50 97.50	AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000066fully formed stage	783 783	97.38 97.38	AEIR AEIR
UBERON:0000160	intestine	[+] 1 stage UBERON:0000066fully formed stage	982 982	96.72 96.72	AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	2.57e3 2.57e3	91.41 91.41	AEIR AEIR
UBERON:0002548	larva	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000069larval stage	2.61e3 2.61e3 4.27e3	91.28 91.28 85.71	AEIR AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	3.17e3 3.17e3	89.39 89.39	AEIR AEIR
UBERON:0002106	spleen	[+] 1 stage UBERON:0000066fully formed stage	3.17e3 3.17e3	89.38 89.38	AEIR AEIR
UBERON:0000922	embryo	[+] 5 stages ZFS:0000037Larval:Day 5 ZFS:0000033Hatching:Long-pec UBERON:0004707pharyngula stage ZFS:0000029Pharyngula:Prim-5 UBERON:0000068embryo stage	3.95e3 3.95e3 4.01e3 6.15e3 7.08e3 8.08e3	86.77 86.77 86.58 79.41 76.28 72.94	AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0000948	heart	[+] 2 stages ZFS:0000036Larval:Day 4 UBERON:0000066fully formed stage	4.50e3 4.50e3 9.51e3	84.92 84.92 68.17	AEIR AEIR AEIR
UBERON:0000970	eye	[+] 1 stage ZFS:0000031Pharyngula:Prim-25	6.70e3 6.70e3	77.56 77.56	AEIR AEIR
UBERON:0000033	head	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000066fully formed stage	7.04e3 7.04e3 1.11e4	76.42 76.42 62.68	AEIR AEIR AEIR
UBERON:0004734	gastrula	[+] 2 stages ZFS:0000022Gastrula:Bud ZFS:0000019Gastrula:Shield	7.60e3 7.60e3 1.40e4	74.54 74.54 53.01	AEIR AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000066fully formed stage	8.07e3 8.07e3	72.99 72.99	AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	8.55e3 8.55e3	71.36 71.36	AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	9.51e3 9.51e3	68.17 68.17	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	9.55e3 9.55e3	68.02 68.02	AEIR AEIR
UBERON:0002385	muscle tissue	[+] 1 stage UBERON:0000066fully formed stage	9.56e3 9.56e3	67.98 67.98	AEIR AEIR
CL:0000094	granulocyte	[+] 1 stage UBERON:0000066fully formed stage	1.02e4 1.02e4	65.75 65.75	AEIR AEIR
UBERON:0000966	retina	[+] 1 stage ZFS:0000037Larval:Day 5	1.08e4 1.08e4	63.76 63.76	AEIR AEIR
UBERON:0001630	muscle organ	[+] 1 stage UBERON:0000066fully formed stage	1.20e4 1.20e4	59.97 59.97	AEIR AEIR
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	1.34e4 1.34e4	55.28 55.28	AEIR AEIR
UBERON:0006860	swim bladder	[+] 1 stage UBERON:0000066fully formed stage	1.35e4 1.35e4	54.76 54.76	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

EST data: Bgee
RNA-Seq data: Bgee

Sources of raw data:

EST data: UniGene
RNA-Seq data: GEO

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Chordata	3 genes ENSDARG00000036237 slc27a2a ENSDARG00000046053 slc27a6 ENSDARG00000067520 zgc:158482	Compare expression	[+]
Deuterostomia	4 genes ENSDARG00000036237 slc27a2a ENSDARG00000046053 slc27a6 ENSDARG00000046054 SLC27A3 ENSDARG00000067520 zgc:158482	Compare expression	[+]
Opisthokonta	7 genes ENSDARG00000006240 slc27a1a ENSDARG00000017047 slc27a4 ENSDARG00000036237 slc27a2a ENSDARG00000046053 slc27a6 ENSDARG00000046054 SLC27A3 ENSDARG00000067520 zgc:158482 ENSDARG00000104949 slc27a1b	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000100731.

Cross-references

Ensembl	ENSDARG00000100731 (slc27a2b)
ZFIN	ZDB-GENE-081104-49 (slc27a2b)
EMBL	CABZ01038928, CABZ01038929, CABZ01054087, CABZ01054088, CU372926, CU633526, FP236858
Uniprot/SPTREMBL	E7FCB6, E7FCB6_DANRE, F6NGD6, F6NGD6_DANRE