Gene: CCBL2 (1 to many) - ENSDARG00000100818 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000100818
Name	CCBL2 (1 to many)
Description	si:ch73-97h19.2 [Source:ZFIN;Acc:ZDB-GENE-120214-33]
Organism	Danio rerio (zebrafish)
Synonym(s)	kat3, rbm1, rp11-82k18.3
Orthologs(s)	27 orthologs
Paralog(s)	11 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	2.51e3 2.51e3	91.60 91.60	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	4.64e3 4.64e3	84.47 84.47	AEIR AEIR
UBERON:0000033	head	[+] 2 stages UBERON:0000066fully formed stage ZFS:0000037Larval:Day 5	8.93e3 8.93e3 1.81e4	70.10 70.10 39.26	AEIR AEIR AEIR
UBERON:0001630	muscle organ	[+] 1 stage UBERON:0000066fully formed stage	1.73e4 1.73e4	42.08 42.08	AEIR AEIR
UBERON:0000307	blastula	[+] 1 stage ZFS:0000011Blastula:1k-cell	1.84e4 1.84e4	38.29 38.29	AEIR AEIR
UBERON:0000948	heart	[+] 2 stages ZFS:0000036Larval:Day 4 UBERON:0000066fully formed stage	1.99e4 1.99e4 2.16e4	33.24 33.24 27.53	AEIR AEIR AEIR
UBERON:0006860	swim bladder	[+] 1 stage UBERON:0000066fully formed stage	2.05e4 2.05e4	31.23 31.23	AEIR AEIR
UBERON:0002548	larva	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000069larval stage	2.06e4 2.06e4 2.58e4	30.86 30.86 13.54	AEIR AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	2.08e4 2.08e4	30.46 30.46	AEIR AEIR
UBERON:0000922	embryo	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000068embryo stage	2.13e4 2.13e4 2.77e4	28.67 28.67 7.41	AEIR AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	2.23e4 2.23e4	25.35 25.35	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Euteleostomi	19 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Monodelphis domestica (opossum) Ornithorhynchus anatinus (platypus) Gallus gallus (chicken) Anolis carolinensis (green anole) Xenopus tropicalis (western clawed frog)	19 genes ENSG00000137944 CCBL2 ENSMUSG00000040213 Ccbl2 ENSPTRG00000041247 CCBL2 ENSGGOG00000012016 CCBL2 ENSMMUG00000018795 CCBL2 ENSRNOG00000043426 Ccbl2 ENSBTAG00000000505 CCBL2 ENSSSCG00000006925 CCBL2 ENSECAG00000023747 CCBL2 ENSOCUG00000007842 CCBL2 ENSCAFG00000020207 CCBL2 ENSFCAG00000007861 CCBL2 ENSCPOG00000009695 CCBL2 ENSEEUG00000000615 CCBL2 ENSMODG00000012408 CCBL2 ENSOANG00000009128 ENSGALG00000006188 CCBL2 ENSACAG00000001299 CCBL2 ENSXETG00000006090 ccbl2	Compare expression	[+]
Bilateria	26 species Homo sapiens (human) Mus musculus (mouse) Drosophila melanogaster (fruit fly) Caenorhabditis elegans (nematode) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Monodelphis domestica (opossum) Ornithorhynchus anatinus (platypus) Gallus gallus (chicken) Anolis carolinensis (green anole) Xenopus tropicalis (western clawed frog) Drosophila ananassae Drosophila mojavensis Drosophila simulans Drosophila virilis Drosophila yakuba	27 genes ENSG00000137944 CCBL2 ENSMUSG00000040213 Ccbl2 FBgn0037955 CG6950 WBGene00009232 nkat-1 WBGene00010984 nkat-3 ENSPTRG00000041247 CCBL2 ENSGGOG00000012016 CCBL2 ENSMMUG00000018795 CCBL2 ENSRNOG00000043426 Ccbl2 ENSBTAG00000000505 CCBL2 ENSSSCG00000006925 CCBL2 ENSECAG00000023747 CCBL2 ENSOCUG00000007842 CCBL2 ENSCAFG00000020207 CCBL2 ENSFCAG00000007861 CCBL2 ENSCPOG00000009695 CCBL2 ENSEEUG00000000615 CCBL2 ENSMODG00000012408 CCBL2 ENSOANG00000009128 ENSGALG00000006188 CCBL2 ENSACAG00000001299 CCBL2 ENSXETG00000006090 ccbl2 FBgn0100056 GF23062 FBgn0145336 GI22608 FBgn0192095 GD20629 FBgn0210948 GJ23853 FBgn0227961 GE10079	Compare expression	[+]

Orthology information comes from OMA : ENSDARG00000100818.

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Otophysi	4 genes ENSDARG00000098222 ccbl2 ENSDARG00000101791 ccbl2 ENSDARG00000102243 CCBL2 (1 to many) ENSDARG00000102423 CCBL2 (1 to many)	Compare expression	[+]
Eumetazoa	5 genes ENSDARG00000023645 ccbl1 ENSDARG00000098222 ccbl2 ENSDARG00000101791 ccbl2 ENSDARG00000102243 CCBL2 (1 to many) ENSDARG00000102423 CCBL2 (1 to many)	Compare expression	[+]
Eukaryota	11 genes ENSDARG00000011410 aadat ENSDARG00000012199 gpt2 ENSDARG00000019541 gpt2l ENSDARG00000023645 ccbl1 ENSDARG00000052124 accs ENSDARG00000055642 GPT (1 to many) ENSDARG00000069630 tat ENSDARG00000098222 ccbl2 ENSDARG00000101791 ccbl2 ENSDARG00000102243 CCBL2 (1 to many) ENSDARG00000102423 CCBL2 (1 to many)	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000100818.

Cross-references

Ensembl	ENSDARG00000100818 (CCBL2 (1 to many))
HGNC	HGNC:33238 (CCBL2 (1 to many))
ZFIN	ZDB-GENE-120214-33 (si:ch73-97h19.2)
EMBL	CU928017
Uniprot/SPTREMBL	F1RB12, F1RB12_DANRE