D. rerio Gene: nme3 - ENSDARG00000100990 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000100990
Namenme3
DescriptionNME/NM23 nucleoside diphosphate kinase 3 [Source:ZFIN;Acc:ZDB-GENE-000210-34]
OrganismDanio rerio (zebrafish)
Synonym(s)ndpk-z3, ndpkz3, ndpkz3gn, nm23-z3, wu:fa99f09, zgc:92672

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
357
  • 357
  • 2.42e3
  • 2.95e3
98.79519
  • 98.79519
  • 91.80715
  • 90.03154
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
704
  • 704
97.62225
  • 97.62225
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000068embryo stage
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0004707pharyngula stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
1.35e3
  • 1.35e3
  • 1.44e3
  • 1.53e3
  • 1.58e3
  • 1.71e3
  • 2.04e3
  • 2.20e3
  • 3.98e3
  • 4.03e3
  • 4.29e3
95.45372
  • 95.45372
  • 95.14295
  • 94.83210
  • 94.67990
  • 94.21696
  • 93.09374
  • 92.57276
  • 86.56384
  • 86.37595
  • 85.49700
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.56e3
  • 1.56e3
94.73732
  • 94.73732
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.70e3
  • 1.70e3
94.26215
  • 94.26215
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.74e3
  • 1.74e3
  • 6.79e3
  • 1.48e4
94.11738
  • 94.11738
  • 77.06271
  • 49.94254
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.84e3
  • 1.84e3
93.77865
  • 93.77865
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • UBERON:0004707pharyngula stage
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • UBERON:0000106zygote stage
  • ZFS:0000049segmentation
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
1.97e3
  • 1.97e3
  • 2.10e3
  • 2.56e3
  • 2.67e3
  • 2.71e3
  • 2.93e3
  • 3.01e3
  • 3.43e3
  • 3.54e3
  • 3.71e3
  • 4.00e3
  • 4.93e3
  • 5.45e3
  • 6.48e3
  • 6.58e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.80e3
  • 6.91e3
  • 6.97e3
  • 7.40e3
  • 7.40e3
  • 7.84e3
  • 8.88e3
  • 8.88e3
  • 1.35e4
  • 1.43e4
  • 1.45e4
  • 1.46e4
93.35544
  • 93.35544
  • 92.91573
  • 91.34879
  • 90.97251
  • 90.84565
  • 90.11070
  • 89.83535
  • 88.39412
  • 88.04864
  • 87.47643
  • 86.49186
  • 83.32826
  • 81.57451
  • 78.11654
  • 77.76763
  • 77.26767
  • 77.26767
  • 77.26767
  • 77.26767
  • 77.26767
  • 77.26767
  • 77.26767
  • 77.26767
  • 77.26767
  • 77.26767
  • 77.26767
  • 77.26767
  • 77.26767
  • 77.02287
  • 76.65821
  • 76.46123
  • 74.99322
  • 74.99322
  • 73.51758
  • 69.98817
  • 69.98817
  • 54.51508
  • 51.51349
  • 50.89926
  • 50.60365
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
2.02e3
  • 2.02e3
  • 2.61e3
  • 2.90e3
  • 3.68e3
  • 6.43e3
93.16546
  • 93.16546
  • 91.18446
  • 90.19151
  • 87.54888
  • 78.26593
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
2.22e3
  • 2.22e3
92.48898
  • 92.48898
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
2.64e3
  • 2.64e3
  • 3.98e3
91.09529
  • 91.09529
  • 86.54454
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
3.40e3
  • 3.40e3
88.52365
  • 88.52365
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
3.48e3
  • 3.48e3
  • 4.06e3
  • 5.13e3
88.22781
  • 88.22781
  • 86.27347
  • 82.68004
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
3.76e3
  • 3.76e3
87.30795
  • 87.30795
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.72e3
  • 4.72e3
84.06368
  • 84.06368
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
5.25e3
  • 5.25e3
  • 5.84e3
82.24214
  • 82.24214
  • 80.25240
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.61e3
  • 5.61e3
81.02851
  • 81.02851
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
7.61e3
  • 7.61e3
74.28219
  • 74.28219
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
7.84e3
  • 7.84e3
  • 1.20e4
73.49532
  • 73.49532
  • 59.59010
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
7.94e3
  • 7.94e3
73.15668
  • 73.15668
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
8.00e3
  • 8.00e3
72.96064
  • 72.96064
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
8.24e3
  • 8.24e3
72.15467
  • 72.15467
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
8.74e3
  • 8.74e3
  • 1.27e4
  • 1.29e4
70.46305
  • 70.46305
  • 57.17151
  • 56.32163
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
65.53158
  • 65.53158
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
  • 1.48e4
62.41720
  • 62.41720
  • 49.93916
AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.20e4
  • 1.20e4
59.34916
  • 59.34916
AEIR
  • AEIR
UBERON:0001997olfactory epithelium
  • UBERON:0000104life cycle
1.30e4
  • 1.30e4
56.15875
  • 56.15875
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.37e4
  • 1.37e4
53.65590
  • 53.65590
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

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