D. rerio Gene: ccnd1 - ENSDARG00000101637 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000101637
Nameccnd1
Descriptioncyclin D1 [Source:ZFIN;Acc:ZDB-GENE-980526-176]
OrganismDanio rerio (zebrafish)
Synonym(s)cb161, cycd1, etid37810.7, fb52e01, fc45c08, fc83a12, id:ibd1198, wu:fb52e01, wu:fc45c08, wu:fc83a12
Orthologs(s)13 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000014Blastula:Sphere
167
  • 167
  • 246
  • 1.04e4
  • 1.17e4
99.44
  • 99.44
  • 99.18
  • 65.20
  • 60.88
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • UBERON:0000068embryo stage
  • UBERON:0000109gastrula stage
  • UBERON:0000104life cycle
  • ZFS:0000049segmentation
  • UBERON:0000066fully formed stage
192
  • 192
  • 345
  • 425
  • 439
  • 457
  • 521
  • 527
  • 598
  • 762
  • 1.23e3
  • 1.32e3
  • 1.92e3
  • 2.41e3
  • 8.95e3
  • 1.19e4
  • 1.38e4
  • 1.40e4
  • 1.49e4
99.36
  • 99.36
  • 98.85
  • 98.58
  • 98.53
  • 98.47
  • 98.26
  • 98.24
  • 98.00
  • 97.45
  • 95.89
  • 95.57
  • 93.58
  • 91.94
  • 70.04
  • 60.00
  • 53.85
  • 53.08
  • 50.25
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
237
  • 237
  • 322
  • 373
  • 544
  • 619
  • 628
99.21
  • 99.21
  • 98.92
  • 98.75
  • 98.18
  • 97.93
  • 97.90
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000032Pharyngula:High-pec
  • UBERON:0000066fully formed stage
280
  • 280
  • 780
  • 1.22e3
  • 6.50e3
  • 6.72e3
  • 1.06e4
99.06
  • 99.06
  • 97.39
  • 95.93
  • 78.25
  • 77.49
  • 64.67
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
554
  • 554
98.15
  • 98.15
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
667
  • 667
  • 704
  • 723
  • 760
  • 854
  • 953
  • 1.06e3
  • 1.26e3
  • 1.43e3
  • 2.44e3
97.77
  • 97.77
  • 97.65
  • 97.58
  • 97.46
  • 97.14
  • 96.81
  • 96.46
  • 95.79
  • 95.22
  • 91.84
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
762
  • 762
97.45
  • 97.45
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
859
  • 859
  • 5.43e3
  • 8.96e3
  • 1.02e4
  • 1.22e4
  • 1.49e4
  • 1.49e4
97.13
  • 97.13
  • 81.81
  • 69.99
  • 65.84
  • 59.08
  • 50.00
  • 49.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
1.23e3
  • 1.23e3
  • 7.47e3
  • 8.09e3
  • 8.25e3
95.90
  • 95.90
  • 74.98
  • 72.90
  • 72.39
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • ZFS:0000028Segmentation:26+ somites
1.29e3
  • 1.29e3
  • 8.79e3
  • 1.49e4
95.70
  • 95.70
  • 70.58
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
1.46e3
  • 1.46e3
  • 1.85e3
  • 2.07e3
95.10
  • 95.10
  • 93.79
  • 93.08
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.53e3
  • 1.53e3
94.87
  • 94.87
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.75e3
  • 1.75e3
  • 2.02e3
94.13
  • 94.13
  • 93.23
AEIR
  • AEIR
  • AEIR
UBERON:0003065ciliary marginal zone
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
2.13e3
  • 2.13e3
  • 2.99e3
  • 1.49e4
  • 1.49e4
92.86
  • 92.86
  • 90.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
2.37e3
  • 2.37e3
  • 7.48e3
  • 1.21e4
92.06
  • 92.06
  • 74.96
  • 59.59
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
4.27e3
  • 4.27e3
  • 4.27e3
  • 5.60e3
85.71
  • 85.71
  • 85.71
  • 81.24
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2000033intermediate cell mass of mesoderm
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
4.27e3
  • 4.27e3
  • 4.98e3
  • 7.86e3
85.71
  • 85.71
  • 83.33
  • 73.67
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000019Gastrula:Shield
4.60e3
  • 4.60e3
  • 5.98e3
  • 7.03e3
  • 7.12e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
84.61
  • 84.61
  • 79.99
  • 76.46
  • 76.18
  • 74.99
  • 74.99
  • 74.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002328notochord
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000025Segmentation:10-13 somites
4.75e3
  • 4.75e3
  • 5.38e3
  • 7.47e3
  • 8.15e3
84.08
  • 84.08
  • 81.99
  • 74.99
  • 72.71
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003902retinal neural layer
  • ZFS:0000031Pharyngula:Prim-25
4.98e3
  • 4.98e3
83.34
  • 83.34
AEIR
  • AEIR
UBERON:0001890forebrain
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
4.98e3
  • 4.98e3
  • 6.89e3
  • 8.04e3
83.33
  • 83.33
  • 76.92
  • 73.07
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001894diencephalon
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
4.98e3
  • 4.98e3
  • 7.47e3
  • 7.91e3
  • 8.45e3
  • 8.83e3
83.33
  • 83.33
  • 74.99
  • 73.52
  • 71.72
  • 70.44
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0010312immature eye
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000027Segmentation:20-25 somites
4.98e3
  • 4.98e3
  • 5.69e3
  • 6.15e3
  • 6.29e3
83.33
  • 83.33
  • 80.94
  • 79.40
  • 78.94
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001891midbrain
  • ZFS:0000026Segmentation:14-19 somites
4.98e3
  • 4.98e3
83.32
  • 83.32
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
5.22e3
  • 5.22e3
82.52
  • 82.52
AEIR
  • AEIR
UBERON:2000083ventral mesoderm
  • ZFS:0000026Segmentation:14-19 somites
5.27e3
  • 5.27e3
82.35
  • 82.35
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.34e3
  • 5.34e3
82.13
  • 82.13
AEIR
  • AEIR
UBERON:0001893telencephalon
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
5.50e3
  • 5.50e3
  • 6.29e3
  • 6.64e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.86e3
  • 7.86e3
81.57
  • 81.57
  • 78.94
  • 77.77
  • 74.99
  • 74.99
  • 74.98
  • 73.67
  • 73.67
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001945superior colliculus
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
5.50e3
  • 5.50e3
  • 6.15e3
  • 7.47e3
  • 7.47e3
81.57
  • 81.57
  • 79.40
  • 74.99
  • 74.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003069otic placode
  • ZFS:0000026Segmentation:14-19 somites
5.50e3
  • 5.50e3
81.57
  • 81.57
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
5.56e3
  • 5.56e3
81.38
  • 81.38
AEIR
  • AEIR
UBERON:0002028hindbrain
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
5.69e3
  • 5.69e3
  • 5.98e3
  • 6.72e3
  • 7.47e3
  • 7.80e3
  • 8.22e3
80.94
  • 80.94
  • 79.99
  • 77.49
  • 74.98
  • 73.90
  • 72.48
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
5.81e3
  • 5.81e3
  • 5.98e3
  • 5.98e3
  • 5.98e3
  • 6.54e3
  • 1.17e4
80.55
  • 80.55
  • 79.99
  • 79.99
  • 79.99
  • 78.12
  • 60.70
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007135neural keel
  • ZFS:0000024Segmentation:5-9 somites
5.97e3
  • 5.97e3
80.00
  • 80.00
AEIR
  • AEIR
UBERON:0001049neural tube
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
5.98e3
  • 5.98e3
  • 7.15e3
  • 7.47e3
  • 7.47e3
79.99
  • 79.99
  • 76.07
  • 74.99
  • 74.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
6.17e3
  • 6.17e3
79.35
  • 79.35
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
6.25e3
  • 6.25e3
79.08
  • 79.08
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
6.60e3
  • 6.60e3
77.89
  • 77.89
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
6.66e3
  • 6.66e3
77.69
  • 77.69
AEIR
  • AEIR
UBERON:0002533post-anal tail bud
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
7.08e3
  • 7.08e3
  • 7.47e3
  • 7.47e3
  • 8.30e3
76.30
  • 76.30
  • 74.99
  • 74.99
  • 72.21
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003051ear vesicle
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
7.08e3
  • 7.08e3
  • 7.47e3
  • 7.47e3
  • 7.80e3
  • 8.15e3
  • 9.25e3
  • 9.47e3
76.30
  • 76.30
  • 74.99
  • 74.99
  • 73.90
  • 72.71
  • 69.03
  • 68.30
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007269pectoral appendage musculature
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
7.08e3
  • 7.08e3
  • 7.08e3
  • 7.47e3
  • 7.47e3
76.30
  • 76.30
  • 76.30
  • 74.99
  • 74.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
7.13e3
  • 7.13e3
76.13
  • 76.13
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
7.22e3
  • 7.22e3
75.83
  • 75.83
AEIR
  • AEIR
UBERON:2000098proliferative region
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
7.47e3
  • 7.47e3
  • 9.96e3
  • 1.05e4
74.99
  • 74.99
  • 66.66
  • 64.99
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001943midbrain tegmentum
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
7.47e3
  • 7.47e3
  • 7.91e3
  • 7.91e3
74.99
  • 74.99
  • 73.52
  • 73.52
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003050olfactory placode
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
74.99
  • 74.99
  • 74.99
  • 74.99
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
7.47e3
  • 7.47e3
  • 7.47e3
  • 8.01e3
  • 8.15e3
  • 8.83e3
74.99
  • 74.99
  • 74.99
  • 73.19
  • 72.71
  • 70.44
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
7.66e3
  • 7.66e3
74.36
  • 74.36
AEIR
  • AEIR
UBERON:0003075neural plate
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
7.86e3
  • 7.86e3
  • 7.86e3
  • 8.54e3
73.67
  • 73.67
  • 73.67
  • 71.41
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005886post-hyoid pharyngeal arch skeleton
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
7.91e3
  • 7.91e3
  • 7.91e3
  • 8.65e3
  • 8.65e3
73.52
  • 73.52
  • 73.52
  • 71.04
  • 71.04
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0010285midbrain basal plate
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
7.91e3
  • 7.91e3
  • 7.91e3
  • 7.91e3
73.52
  • 73.52
  • 73.52
  • 73.52
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
8.13e3
  • 8.13e3
72.78
  • 72.78
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
8.52e3
  • 8.52e3
71.47
  • 71.47
AEIR
  • AEIR
UBERON:0001846internal ear
  • UBERON:0000068embryo stage
8.59e3
  • 8.59e3
71.25
  • 71.25
AEIR
  • AEIR
UBERON:0010170region of neural crest
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
8.96e3
  • 8.96e3
  • 9.96e3
69.99
  • 69.99
  • 66.65
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
62.66
  • 62.66
AEIR
  • AEIR
UBERON:0003072optic cup
  • ZFS:0000029Pharyngula:Prim-5
1.19e4
  • 1.19e4
59.99
  • 59.99
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
1.24e4
  • 1.24e4
  • 1.29e4
  • 1.34e4
58.33
  • 58.33
  • 56.65
  • 55.16
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003053ventricular zone
  • ZFS:0000033Hatching:Long-pec
1.26e4
  • 1.26e4
57.68
  • 57.68
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.27e4
  • 1.27e4
57.50
  • 57.50
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
55.69
  • 55.69
AEIR
  • AEIR
UBERON:0004128optic vesicle
  • ZFS:0000027Segmentation:20-25 somites
1.41e4
  • 1.41e4
52.92
  • 52.92
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.85e4
  • 1.85e4
38.04
  • 38.04
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata2 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000101637.

Cross-references

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