D. rerio Gene: ptmab - ENSDARG00000101766 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000101766
Nameptmab
Descriptionprothymosin, alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
OrganismDanio rerio (zebrafish)
Synonym(s)fa94b10, wu:fa94b10, zgc:165530
Paralog(s)439 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
13.7
  • 13.7
99.96
  • 99.96
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
17.6
  • 17.6
  • 24.9
  • 47.4
  • 130
99.94
  • 99.94
  • 99.92
  • 99.84
  • 99.57
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
46.2
  • 46.2
  • 58.0
  • 87.7
  • 101
  • 110
  • 114
  • 159
  • 176
  • 192
  • 196
99.85
  • 99.85
  • 99.81
  • 99.71
  • 99.67
  • 99.63
  • 99.62
  • 99.47
  • 99.41
  • 99.36
  • 99.35
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000109gastrula stage
54.7
  • 54.7
  • 76.8
  • 80.8
  • 119
  • 129
  • 287
99.82
  • 99.82
  • 99.75
  • 99.73
  • 99.61
  • 99.57
  • 99.04
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
64.2
  • 64.2
99.79
  • 99.79
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
66.5
  • 66.5
  • 106
  • 197
  • 556
  • 679
99.78
  • 99.78
  • 99.65
  • 99.34
  • 98.14
  • 97.73
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000036Larval:Day 4
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • UBERON:0000106zygote stage
  • UBERON:0000068embryo stage
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000049segmentation
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
94.7
  • 94.7
  • 123
  • 130
  • 136
  • 157
  • 179
  • 195
  • 207
  • 221
  • 228
  • 260
  • 391
  • 433
  • 2.83e3
  • 6.29e3
  • 8.96e3
  • 1.16e4
  • 1.17e4
  • 1.38e4
  • 1.39e4
99.69
  • 99.69
  • 99.59
  • 99.57
  • 99.55
  • 99.48
  • 99.40
  • 99.35
  • 99.31
  • 99.26
  • 99.24
  • 99.13
  • 98.69
  • 98.55
  • 90.52
  • 78.95
  • 69.99
  • 61.10
  • 60.90
  • 53.85
  • 53.30
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
101
  • 101
99.67
  • 99.67
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
119
  • 119
99.60
  • 99.60
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
124
  • 124
  • 126
  • 6.64e3
  • 1.22e4
  • 1.36e4
99.59
  • 99.59
  • 99.58
  • 77.75
  • 59.08
  • 54.53
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
137
  • 137
99.55
  • 99.55
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
142
  • 142
99.53
  • 99.53
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
162
  • 162
  • 296
99.46
  • 99.46
  • 99.01
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
191
  • 191
99.36
  • 99.36
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
200
  • 200
99.33
  • 99.33
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
212
  • 212
  • 656
  • 8.05e3
99.29
  • 99.29
  • 97.81
  • 73.06
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
228
  • 228
  • 235
  • 240
99.24
  • 99.24
  • 99.22
  • 99.20
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
241
  • 241
99.20
  • 99.20
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
288
  • 288
99.04
  • 99.04
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
290
  • 290
99.03
  • 99.03
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
343
  • 343
  • 1.50e4
98.85
  • 98.85
  • 49.89
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
385
  • 385
98.71
  • 98.71
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
394
  • 394
98.68
  • 98.68
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
435
  • 435
  • 1.19e4
98.55
  • 98.55
  • 60.00
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
483
  • 483
98.39
  • 98.39
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
499
  • 499
98.33
  • 98.33
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
591
  • 591
  • 1.22e4
  • 1.29e4
98.03
  • 98.03
  • 59.16
  • 56.65
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
720
  • 720
97.59
  • 97.59
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
947
  • 947
96.83
  • 96.83
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
1.02e3
  • 1.02e3
96.59
  • 96.59
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.27e3
  • 1.27e3
95.75
  • 95.75
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.38e3
  • 1.38e3
95.39
  • 95.39
AEIR
  • AEIR
UBERON:0001846internal ear
  • UBERON:0000068embryo stage
2.49e3
  • 2.49e3
91.65
  • 91.65
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
4.03e3
  • 4.03e3
86.52
  • 86.52
AEIR
  • AEIR
UBERON:0001997olfactory epithelium
  • UBERON:0000104life cycle
4.44e3
  • 4.44e3
85.13
  • 85.13
AEIR
  • AEIR
CL:0000745retina horizontal cell
  • ZFS:0000035Larval:Protruding-mouth
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:0008904neuromast
  • ZFS:0000033Hatching:Long-pec
1.17e4
  • 1.17e4
60.70
  • 60.70
AEIR
  • AEIR
UBERON:0000151pectoral fin
  • ZFS:0000033Hatching:Long-pec
1.21e4
  • 1.21e4
59.36
  • 59.36
AEIR
  • AEIR
UBERON:2001157posterior lateral line primordium
  • ZFS:0000029Pharyngula:Prim-5
1.24e4
  • 1.24e4
58.33
  • 58.33
AEIR
  • AEIR
UBERON:0005419pectoral appendage bud
  • ZFS:0000029Pharyngula:Prim-5
1.28e4
  • 1.28e4
57.12
  • 57.12
AEIR
  • AEIR
UBERON:0002240spinal cord
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
1.28e4
  • 1.28e4
  • 1.34e4
57.11
  • 57.11
  • 55.24
AEIR
  • AEIR
  • AEIR
UBERON:0003051ear vesicle
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
1.30e4
  • 1.30e4
  • 1.35e4
56.49
  • 56.49
  • 54.96
AEIR
  • AEIR
  • AEIR
UBERON:0001017central nervous system
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
1.34e4
  • 1.34e4
  • 1.41e4
55.24
  • 55.24
  • 52.92
AEIR
  • AEIR
  • AEIR
UBERON:0003050olfactory placode
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
1.34e4
  • 1.34e4
  • 1.41e4
54.97
  • 54.97
  • 52.75
AEIR
  • AEIR
  • AEIR
UBERON:0003060pronephric duct
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
1.34e4
  • 1.34e4
  • 1.34e4
54.97
  • 54.97
  • 54.97
AEIR
  • AEIR
  • AEIR
UBERON:0010312immature eye
  • ZFS:0000029Pharyngula:Prim-5
1.35e4
  • 1.35e4
54.73
  • 54.73
AEIR
  • AEIR
UBERON:0002539pharyngeal arch
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000033Hatching:Long-pec
1.36e4
  • 1.36e4
  • 1.40e4
54.53
  • 54.53
  • 53.10
AEIR
  • AEIR
  • AEIR
UBERON:2001316anterior lateral line placode
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
CL:0000561amacrine cell
  • ZFS:0000035Larval:Protruding-mouth
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eukaryota439 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000101766.

Cross-references

EnsemblENSDARG00000101766 (ptmab)
ZFINZDB-GENE-030131-8681 (ptmab)
EMBLBC142847
Uniprot/SWISSPROTA5PLC8, PTMAB_DANRE

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