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D. rerio Gene: magi3a - ENSDARG00000101869 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000101869
Namemagi3a
Descriptionmembrane associated guanylate kinase, WW and PDZ domain containing 3a [Source:ZFIN;Acc:ZDB-GENE-090312-48]
OrganismDanio rerio (zebrafish)
Synonym(s)magi3, si:ch211-139k15.1
Orthologs(s)19 orthologs
Paralog(s)5 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
3.26e3
  • 3.26e3
89.07
  • 89.07
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
3.75e3
  • 3.75e3
  • 4.01e3
87.45
  • 87.45
  • 86.57
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
4.40e3
  • 4.40e3
85.26
  • 85.26
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
4.78e3
  • 4.78e3
83.99
  • 83.99
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
5.80e3
  • 5.80e3
80.57
  • 80.57
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
6.25e3
  • 6.25e3
79.08
  • 79.08
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
6.48e3
  • 6.48e3
78.30
  • 78.30
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
7.27e3
  • 7.27e3
  • 8.01e3
75.67
  • 75.67
  • 73.19
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
7.35e3
  • 7.35e3
75.39
  • 75.39
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
7.74e3
  • 7.74e3
74.10
  • 74.10
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
7.92e3
  • 7.92e3
  • 1.00e4
73.48
  • 73.48
  • 66.47
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
8.07e3
  • 8.07e3
72.98
  • 72.98
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
8.79e3
  • 8.79e3
70.56
  • 70.56
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
8.92e3
  • 8.92e3
70.13
  • 70.13
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
8.96e3
  • 8.96e3
  • 1.11e4
70.00
  • 70.00
  • 62.71
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
9.04e3
  • 9.04e3
69.74
  • 69.74
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
9.26e3
  • 9.26e3
  • 9.33e3
  • 1.01e4
  • 1.03e4
  • 1.14e4
68.99
  • 68.99
  • 68.76
  • 66.03
  • 65.47
  • 61.69
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
9.43e3
  • 9.43e3
68.43
  • 68.43
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
9.87e3
  • 9.87e3
  • 1.43e4
66.97
  • 66.97
  • 52.05
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
9.95e3
  • 9.95e3
66.68
  • 66.68
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
59.86
  • 59.86
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.28e4
  • 1.28e4
57.20
  • 57.20
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.51e4
  • 1.51e4
49.49
  • 49.49
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.74e4
  • 1.74e4
41.75
  • 41.75
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.06e4
  • 2.06e4
30.87
  • 30.87
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eumetazoa5 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000101869.

Cross-references

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