D. rerio Gene: b3galt2 - ENSDARG00000102061 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000102061
Nameb3galt2
DescriptionUDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2078]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:76904
Orthologs(s)18 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
1.33e3
  • 1.33e3
  • 3.29e3
  • 5.37e3
  • 6.16e3
95.56
  • 95.56
  • 88.99
  • 82.03
  • 79.38
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
2.69e3
  • 2.69e3
90.99
  • 90.99
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • UBERON:0000106zygote stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
2.90e3
  • 2.90e3
  • 4.74e3
  • 6.55e3
  • 6.55e3
  • 8.26e3
  • 9.37e3
  • 1.03e4
  • 1.05e4
  • 1.11e4
  • 1.12e4
  • 1.12e4
  • 1.13e4
  • 1.14e4
  • 1.14e4
  • 1.16e4
  • 1.19e4
90.28
  • 90.28
  • 84.13
  • 78.08
  • 78.08
  • 72.34
  • 68.62
  • 65.61
  • 64.84
  • 62.70
  • 62.60
  • 62.46
  • 62.11
  • 61.83
  • 61.75
  • 61.00
  • 60.27
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
3.23e3
  • 3.23e3
89.20
  • 89.20
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
3.58e3
  • 3.58e3
88.03
  • 88.03
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0004707pharyngula stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000068embryo stage
3.67e3
  • 3.67e3
  • 6.21e3
  • 6.71e3
  • 9.48e3
  • 9.87e3
  • 1.03e4
  • 1.05e4
  • 1.08e4
  • 1.10e4
  • 1.18e4
87.73
  • 87.73
  • 79.21
  • 77.53
  • 68.26
  • 66.95
  • 65.52
  • 64.95
  • 63.87
  • 63.28
  • 60.50
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
3.98e3
  • 3.98e3
  • 4.01e3
  • 6.96e3
  • 8.31e3
  • 1.16e4
86.66
  • 86.66
  • 86.56
  • 76.70
  • 72.17
  • 61.20
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
4.38e3
  • 4.38e3
  • 4.53e3
  • 5.36e3
85.35
  • 85.35
  • 84.84
  • 82.04
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
4.52e3
  • 4.52e3
  • 8.44e3
84.88
  • 84.88
  • 71.73
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
4.67e3
  • 4.67e3
84.36
  • 84.36
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
5.06e3
  • 5.06e3
83.07
  • 83.07
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
5.25e3
  • 5.25e3
82.44
  • 82.44
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
5.59e3
  • 5.59e3
81.28
  • 81.28
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
5.86e3
  • 5.86e3
  • 7.29e3
80.38
  • 80.38
  • 75.59
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
5.86e3
  • 5.86e3
80.38
  • 80.38
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
6.63e3
  • 6.63e3
77.82
  • 77.82
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
6.77e3
  • 6.77e3
77.34
  • 77.34
AEIR
  • AEIR
UBERON:0001017central nervous system
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
7.03e3
  • 7.03e3
  • 7.03e3
  • 7.08e3
  • 8.54e3
  • 8.96e3
  • 9.19e3
  • 9.60e3
76.46
  • 76.46
  • 76.46
  • 76.30
  • 71.42
  • 69.99
  • 69.22
  • 67.85
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
7.71e3
  • 7.71e3
74.19
  • 74.19
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
7.74e3
  • 7.74e3
  • 8.04e3
74.09
  • 74.09
  • 73.09
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000019Gastrula:Shield
7.89e3
  • 7.89e3
  • 1.01e4
  • 1.04e4
  • 1.09e4
  • 1.11e4
  • 1.25e4
73.60
  • 73.60
  • 66.26
  • 65.06
  • 63.35
  • 62.96
  • 58.12
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001905pineal body
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
7.97e3
  • 7.97e3
  • 8.40e3
  • 9.25e3
  • 9.34e3
  • 9.96e3
73.32
  • 73.32
  • 71.86
  • 69.03
  • 68.74
  • 66.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.13e3
  • 8.13e3
72.78
  • 72.78
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
8.90e3
  • 8.90e3
70.19
  • 70.19
AEIR
  • AEIR
CL:0000540neuron
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
8.96e3
  • 8.96e3
  • 8.96e3
  • 9.34e3
  • 9.34e3
  • 9.51e3
69.98
  • 69.98
  • 69.98
  • 68.74
  • 68.74
  • 68.16
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
9.16e3
  • 9.16e3
69.33
  • 69.33
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
9.18e3
  • 9.18e3
69.27
  • 69.27
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
9.23e3
  • 9.23e3
69.11
  • 69.11
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
9.85e3
  • 9.85e3
67.03
  • 67.03
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
9.96e3
  • 9.96e3
66.64
  • 66.64
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.02e4
  • 1.02e4
65.83
  • 65.83
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.53
  • 64.53
AEIR
  • AEIR
UBERON:0003070trigeminal placode complex
  • ZFS:0000026Segmentation:14-19 somites
1.07e4
  • 1.07e4
64.27
  • 64.27
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
58.84
  • 58.84
AEIR
  • AEIR
UBERON:2000083ventral mesoderm
  • ZFS:0000026Segmentation:14-19 somites
1.23e4
  • 1.23e4
58.80
  • 58.80
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.24e4
  • 1.24e4
58.63
  • 58.63
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.37e4
  • 1.37e4
54.04
  • 54.04
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Vertebrata1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000102061.

Cross-references

EnsemblENSDARG00000102061 (b3galt2)
ZFINZDB-GENE-040426-2078 (b3galt2)
EMBLFP102166
Uniprot/SPTREMBLF2Z4T8, F2Z4T8_DANRE

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