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D. rerio Gene: MYH13 (1 to many) - ENSDARG00000102414 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000102414
NameMYH13 (1 to many)
Descriptionmyosin, heavy chain 13, skeletal muscle [Source:HGNC Symbol;Acc:HGNC:7571]
OrganismDanio rerio (zebrafish)
Synonym(s)f1rbv5, fd14a01, myhc-eo
Orthologs(s)82 orthologs
Paralog(s)21 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
181
  • 181
99.40
  • 99.40
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
206
  • 206
99.31
  • 99.31
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
214
  • 214
99.29
  • 99.29
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
216
  • 216
99.28
  • 99.28
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
229
  • 229
  • 7.35e3
99.24
  • 99.24
  • 75.40
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
353
  • 353
98.82
  • 98.82
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
498
  • 498
98.34
  • 98.34
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
  • ZFS:0000024Segmentation:5-9 somites
733
  • 733
  • 2.06e3
  • 3.73e3
  • 1.36e4
  • 1.43e4
  • 1.44e4
  • 1.44e4
  • 1.45e4
97.55
  • 97.55
  • 93.10
  • 87.50
  • 54.33
  • 52.27
  • 51.82
  • 51.68
  • 51.60
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
1.43e3
  • 1.43e3
  • 3.84e3
  • 8.67e3
95.20
  • 95.20
  • 87.15
  • 70.97
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.10e3
  • 2.10e3
92.96
  • 92.96
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000025Segmentation:10-13 somites
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
2.16e3
  • 2.16e3
  • 1.28e4
  • 1.61e4
  • 1.78e4
  • 1.78e4
  • 1.86e4
  • 1.99e4
92.78
  • 92.78
  • 57.28
  • 45.96
  • 40.54
  • 40.40
  • 37.80
  • 33.33
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
9.29e3
  • 9.29e3
68.91
  • 68.91
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
57.90
  • 57.90
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.33e4
  • 1.33e4
  • 1.73e4
55.61
  • 55.61
  • 41.91
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.57e4
  • 1.57e4
47.51
  • 47.51
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.60e4
  • 1.60e4
46.40
  • 46.40
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.61e4
  • 1.61e4
  • 1.95e4
46.20
  • 46.20
  • 34.67
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.01e4
  • 2.01e4
32.72
  • 32.72
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.16e4
  • 2.16e4
27.68
  • 27.68
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi19 species72 genesCompare expression
Bilateria25 species82 genesCompare expression

Orthology information comes from OMA : ENSDARG00000102414.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Neopterygii7 genesCompare expression
Chordata16 genesCompare expression
Bilateria17 genesCompare expression
Eukaryota21 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000102414.

Cross-references

EnsemblENSDARG00000102414 (MYH13 (1 to many))
HGNCHGNC:7571 (MYH13 (1 to many))
EMBLCABZ01079178
Uniprot/SPTREMBLE7FAD0, E7FAD0_DANRE

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