Gene: slc16a5b - ENSDARG00000102668 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000102668
Name	slc16a5b
Description	solute carrier family 16 (monocarboxylate transporter), member 5b [Source:ZFIN;Acc:ZDB-GENE-131120-181]
Organism	Danio rerio (zebrafish)
Synonym(s)	si:dkey-217l10.3
Orthologs(s)	16 orthologs
Paralog(s)	19 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	1.39e4 1.39e4	53.56 53.56	AEIR AEIR
UBERON:0000992	female gonad	[+] 1 stage UBERON:0000066fully formed stage	1.54e4 1.54e4	48.45 48.45	AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	1.79e4 1.79e4	40.16 40.16	AEIR AEIR
UBERON:0000033	head	[+] 1 stage UBERON:0000066fully formed stage	1.81e4 1.81e4	39.28 39.28	AEIR AEIR
UBERON:0000307	blastula	[+] 1 stage ZFS:0000011Blastula:1k-cell	1.84e4 1.84e4	38.55 38.55	AEIR AEIR
UBERON:0000922	embryo	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000068embryo stage	2.28e4 2.28e4 2.77e4	23.51 23.51 7.41	AEIR AEIR AEIR
UBERON:0002548	larva	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000069larval stage	2.33e4 2.33e4 2.66e4	21.93 21.93 10.92	AEIR AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	2.63e4 2.63e4	12.03 12.03	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Euteleostomi	16 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Monodelphis domestica (opossum) Gallus gallus (chicken) Anolis carolinensis (green anole) Xenopus tropicalis (western clawed frog)	16 genes ENSG00000170190 SLC16A5 ENSMUSG00000045775 Slc16a5 ENSPTRG00000009630 SLC16A5 ENSGGOG00000024914 SLC16A5 ENSRNOG00000023476 Slc16a5 ENSBTAG00000001110 SLC16A5 ENSSSCG00000017215 SLC16A5 ENSECAG00000021415 SLC16A5 ENSOCUG00000016231 SLC16A5 ENSCAFG00000004718 SLC16A5 ENSFCAG00000014507 SLC16A5 ENSCPOG00000004024 SLC16A5 ENSMODG00000007170 SLC16A5 ENSGALG00000007955 SLC16A5 ENSACAG00000006160 SLC16A5 ENSXETG00000012500 slc16a5	Compare expression	[+]

Orthology information comes from OMA : ENSDARG00000102668.

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Euteleostomi	1 gene ENSDARG00000030472 slc16a5a	Compare expression	[+]
Opisthokonta	19 genes ENSDARG00000013775 si:dkey-246g23.4 ENSDARG00000013926 slc16a9a ENSDARG00000016963 slc16a1a ENSDARG00000017773 slc16a12a ENSDARG00000020984 slc16a10 ENSDARG00000021573 slc16a7 ENSDARG00000028583 SLC16A3 (1 to many) ENSDARG00000030472 slc16a5a ENSDARG00000045051 slc16a3 ENSDARG00000045153 slc16a8 ENSDARG00000052109 zgc:114041 ENSDARG00000055342 SLC16A13 ENSDARG00000060246 slc16a6b ENSDARG00000068572 slc16a1b ENSDARG00000089885 slc16a12b ENSDARG00000098258 SLC16A7 ENSDARG00000102793 slc16a6a ENSDARG00000104629 SLC16A6 (1 to many) ENSDARG00000104687 slc16a9b	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000102668.

Cross-references

Ensembl	ENSDARG00000102668 (slc16a5b)
ZFIN	ZDB-GENE-131120-181 (slc16a5b)
EMBL	BX682555
Uniprot/SPTREMBL	E7F512, E7F512_DANRE