D. rerio Gene: si:ch73-138e16.8 - ENSDARG00000102738 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000102738
Namesi:ch73-138e16.8
Descriptionsi:ch73-138e16.8 [Source:ZFIN;Acc:ZDB-GENE-070705-207]
OrganismDanio rerio (zebrafish)
Paralog(s)439 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
8.52e3
  • 8.52e3
71.47
  • 71.47
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
8.93e3
  • 8.93e3
70.09
  • 70.09
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
8.99e3
  • 8.99e3
69.89
  • 69.89
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
9.31e3
  • 9.31e3
68.84
  • 68.84
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
9.39e3
  • 9.39e3
68.58
  • 68.58
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
9.47e3
  • 9.47e3
  • 9.51e3
68.28
  • 68.28
  • 68.15
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
9.49e3
  • 9.49e3
68.23
  • 68.23
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.65e3
  • 9.65e3
67.68
  • 67.68
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
1.02e4
  • 1.02e4
  • 1.04e4
  • 1.19e4
  • 1.20e4
  • 1.29e4
65.94
  • 65.94
  • 65.32
  • 60.09
  • 59.98
  • 56.89
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.12
  • 65.12
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
  • 1.29e4
64.76
  • 64.76
  • 56.86
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.10e4
  • 1.10e4
63.28
  • 63.28
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
  • 1.76e4
62.70
  • 62.70
  • 40.94
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.15
  • 62.15
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.14e4
  • 1.14e4
61.69
  • 61.69
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.18e4
  • 1.18e4
  • 1.23e4
60.47
  • 60.47
  • 58.70
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.09
  • 60.09
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.19e4
  • 1.19e4
  • 1.22e4
60.03
  • 60.03
  • 59.01
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
57.21
  • 57.21
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.31e4
  • 1.31e4
56.16
  • 56.16
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.36e4
  • 1.36e4
54.55
  • 54.55
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.39e4
  • 1.39e4
53.30
  • 53.30
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.53e4
  • 1.53e4
48.85
  • 48.85
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.69e4
  • 1.69e4
43.27
  • 43.27
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.84e4
  • 1.84e4
38.49
  • 38.49
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eukaryota439 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000102738.

Cross-references

EnsemblENSDARG00000102738 (si:ch73-138e16.8)
ZFINZDB-GENE-070705-207 (si:ch73-138e16.8)
EMBLBC162860, BC162863, BX322657
Uniprot/SPTREMBLA5PMB3, A5PMB3_DANRE

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