D. rerio Gene: bmpr1bb - ENSDARG00000102742 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000102742
Namebmpr1bb
Descriptionbone morphogenetic protein receptor, type IBb [Source:ZFIN;Acc:ZDB-GENE-090610-1]
OrganismDanio rerio (zebrafish)
Synonym(s)alk6b, zgc:172219
Orthologs(s)19 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.75e3
  • 2.75e3
90.79
  • 90.79
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
3.79e3
  • 3.79e3
87.32
  • 87.32
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
5.63e3
  • 5.63e3
81.16
  • 81.16
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
6.60e3
  • 6.60e3
  • 9.89e3
77.90
  • 77.90
  • 66.89
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
7.19e3
  • 7.19e3
75.94
  • 75.94
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
7.92e3
  • 7.92e3
73.49
  • 73.49
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
8.51e3
  • 8.51e3
  • 1.11e4
71.49
  • 71.49
  • 62.96
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
8.61e3
  • 8.61e3
  • 9.11e3
  • 1.07e4
  • 1.10e4
  • 1.23e4
71.17
  • 71.17
  • 69.49
  • 64.27
  • 63.03
  • 58.83
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
8.87e3
  • 8.87e3
70.29
  • 70.29
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
9.91e3
  • 9.91e3
  • 1.04e4
66.82
  • 66.82
  • 65.24
AEIR
  • AEIR
  • AEIR
UBERON:0002539pharyngeal arch
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
9.96e3
  • 9.96e3
  • 1.41e4
66.65
  • 66.65
  • 52.92
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
62.55
  • 62.55
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.13e4
  • 1.13e4
62.21
  • 62.21
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.21e4
  • 1.21e4
59.57
  • 59.57
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.24e4
  • 1.24e4
58.56
  • 58.56
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000029Pharyngula:Prim-5
1.24e4
  • 1.24e4
58.33
  • 58.33
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
  • 1.83e4
57.67
  • 57.67
  • 38.61
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.30e4
  • 1.30e4
56.34
  • 56.34
AEIR
  • AEIR
UBERON:0002328notochord
  • ZFS:0000026Segmentation:14-19 somites
1.32e4
  • 1.32e4
55.97
  • 55.97
AEIR
  • AEIR
UBERON:0010312immature eye
  • ZFS:0000026Segmentation:14-19 somites
1.33e4
  • 1.33e4
55.53
  • 55.53
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.36e4
  • 1.36e4
54.46
  • 54.46
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.46e4
  • 1.46e4
51.04
  • 51.04
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.60e4
  • 1.60e4
46.40
  • 46.40
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.66e4
  • 1.66e4
  • 2.02e4
44.43
  • 44.43
  • 32.50
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.97e4
  • 1.97e4
33.89
  • 33.89
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.11e4
  • 2.11e4
29.46
  • 29.46
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.23e4
  • 2.23e4
25.40
  • 25.40
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Vertebrata1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000102742.

Cross-references

EnsemblENSDARG00000102742 (bmpr1bb)
ZFINZDB-GENE-090610-1 (bmpr1bb)
EMBLCABZ01111741
Uniprot/SPTREMBLF1R9T6, F1R9T6_DANRE

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